Analysis of interatomic Contacts of Structural Units in PDB entry:
4U07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U07 entry

There are 2 chains in PDB entry 4U07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 108THR 433
B
 ALA 108THR 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4U07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
109 118Right-handed alpha
Helix 2
AA2
A
121 135Right-handed alpha
Helix 3
AA3
A
139 153Right-handed alpha
Helix 4
AA4
A
155 170Right-handed alpha
Helix 5
AA5
A
173 206Right-handed alpha
Helix 6
AA6
A
215 233Right-handed alpha
Helix 7
AA7
A
239 250Right-handed alpha
Helix 8
AA8
A
257 278Right-handed alpha
Helix 9
AA9
A
286 298Right-handed alpha
Helix 10
AB1
A
326 340Right-handed alpha
Helix 11
AB2
A
340 345Right-handed alpha
Helix 12
AB3
A
347 363Right-handed alpha
Helix 13
AB4
A
368 384Right-handed alpha
Helix 14
AB5
A
392 394Right-handed 310
Helix 15
AB6
A
395 408Right-handed alpha
Helix 16
AB7
A
411 431Right-handed alpha
Helix 17
AB8
B
109 118Right-handed alpha
Helix 18
AB9
B
121 136Right-handed alpha
Helix 19
AC1
B
139 153Right-handed alpha
Helix 20
AC2
B
155 170Right-handed alpha
Helix 21
AC3
B
173 206Right-handed alpha
Helix 22
AC4
B
215 233Right-handed alpha
Helix 23
AC5
B
239 250Right-handed alpha
Helix 24
AC6
B
257 278Right-handed alpha
Helix 25
AC7
B
286 298Right-handed alpha
Helix 26
AC8
B
326 340Right-handed alpha
Helix 27
AC9
B
340 345Right-handed alpha
Helix 28
AD1
B
347 363Right-handed alpha
Helix 29
AD2
B
368 384Right-handed alpha
Helix 30
AD3
B
392 394Right-handed 310
Helix 31
AD4
B
395 409Right-handed alpha
Helix 32
AD5
B
411 432Right-handed alpha
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There are no sheets in PDB entry 4U07
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il