Analysis of interatomic Contacts of Structural Units in PDB entry:
4U10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4U10 entry

There are 2 chains in PDB entry 4U10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 25	ASP 288
B	ASP 26	LEU 287

There are 22 helices in PDB entry 4U10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	55	67	Right-handed alpha
Helix 2	AA2	A	74	83	Right-handed alpha
Helix 3	AA3	A	102	107	Right-handed alpha
Helix 4	AA4	A	107	116	Right-handed alpha
Helix 5	AA5	A	124	129	Right-handed alpha
Helix 6	AA6	A	144	148	Right-handed 310
Helix 7	AA7	A	150	160	Right-handed alpha
Helix 8	AA8	A	200	224	Right-handed alpha
Helix 9	AA9	A	233	236	Right-handed 310
Helix 10	AB1	A	238	247	Right-handed alpha
Helix 11	AB2	A	279	288	Right-handed alpha
Helix 12	AB3	B	55	68	Right-handed alpha
Helix 13	AB4	B	74	83	Right-handed alpha
Helix 14	AB5	B	102	107	Right-handed alpha
Helix 15	AB6	B	107	116	Right-handed alpha
Helix 16	AB7	B	124	129	Right-handed alpha
Helix 17	AB8	B	146	148	Right-handed 310
Helix 18	AB9	B	150	160	Right-handed alpha
Helix 19	AC1	B	200	224	Right-handed alpha
Helix 20	AC2	B	233	236	Right-handed 310
Helix 21	AC3	B	238	248	Right-handed alpha
Helix 22	AC4	B	279	287	Right-handed alpha

There are 14 sheets in PDB entry 4U10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	72	first strand
Strand 2	A	92	99	parallel
Strand 3	A	27	33	parallel
Strand 4	A	262	263	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	165	first strand
Strand 2	A	119	123	parallel
Strand 3	A	92	99	parallel
Strand 4	A	27	33	parallel
Strand 5	A	272	273	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	53	54	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	138	first strand
Strand 2	A	141	143	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	177	first strand
Strand 2	A	184	186	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	194	first strand
Strand 2	A	197	198	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	231	first strand
Strand 2	A	252	254	parallel
Strand 3	A	268	269	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	72	first strand
Strand 2	B	92	99	parallel
Strand 3	B	27	33	parallel
Strand 4	B	262	263	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	165	first strand
Strand 2	B	119	123	parallel
Strand 3	B	92	99	parallel
Strand 4	B	27	33	parallel
Strand 5	B	272	273	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	53	54	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	138	first strand
Strand 2	B	141	144	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	177	first strand
Strand 2	B	184	186	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	194	first strand
Strand 2	B	197	198	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	231	first strand
Strand 2	B	252	254	parallel
Strand 3	B	268	269	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4U10

Analysis of interatomic Contacts of Structural Units in PDB entry:
4U10