Analysis of interatomic Contacts of Structural Units in PDB entry:
4U4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U4V entry

There is 1 chain in PDB entry 4U4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 13LYS 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4U4V. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
22 29Right-handed alpha
Helix 2
AA2
A
29 53Right-handed alpha
Helix 3
AA3
A
54 62Right-handed alpha
Helix 4
AA4
A
70 80Right-handed alpha
Helix 5
AA5
A
80 100Right-handed alpha
Helix 6
AA6
A
100 111Right-handed alpha
Helix 7
AA7
A
112 123Right-handed alpha
Helix 8
AA8
A
129 141Right-handed alpha
Helix 9
AA9
A
142 144Right-handed 310
Helix 10
AB1
A
145 157Right-handed alpha
Helix 11
AB2
A
159 176Right-handed alpha
Helix 12
AB3
A
176 189Right-handed alpha
Helix 13
AB4
A
194 198Right-handed 310
Helix 14
AB5
A
213 218Right-handed alpha
Helix 15
AB6
A
218 234Right-handed alpha
Helix 16
AB7
A
248 252Right-handed 310
Helix 17
AB8
A
253 285Right-handed alpha
Helix 18
AB9
A
289 294Right-handed 310
Helix 19
AC1
A
295 316Right-handed alpha
Helix 20
AC2
A
316 335Right-handed alpha
Helix 21
AC3
A
336 339Right-handed 310
Helix 22
AC4
A
347 388Right-handed alpha
Helix 23
AC5
A
391 415Right-handed alpha
Helix 24
AC6
A
416 433Right-handed alpha
Helix 25
AC7
A
435 460Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4U4V.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il