Analysis of interatomic Contacts of Structural Units in PDB entry:
4U6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U6U entry

There are 4 chains in PDB entry 4U6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8PRO 74
B
 GLN 105ASP 386
C
 ALA 8PRO 74
D
 GLN 105THR 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 4U6U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 17Right-handed alpha
Helix 2
AA2
A
22 32Right-handed alpha
Helix 3
AA3
A
40 72Right-handed alpha
Helix 4
AA4
B
107 145Right-handed alpha
Helix 5
AA5
B
157 179Right-handed alpha
Helix 6
AA6
B
180 183Right-handed 310
Helix 7
AA7
B
188 193Right-handed alpha
Helix 8
AA8
B
195 216Right-handed alpha
Helix 9
AA9
B
218 224Right-handed alpha
Helix 10
AB1
B
224 239Right-handed alpha
Helix 11
AB2
B
239 265Right-handed alpha
Helix 12
AB3
B
266 270Right-handed 310
Helix 13
AB4
B
271 290Right-handed alpha
Helix 14
AB5
B
303 311Right-handed alpha
Helix 15
AB6
B
316 339Right-handed alpha
Helix 16
AB7
B
341 350Right-handed alpha
Helix 17
AB8
B
350 363Right-handed alpha
Helix 18
AB9
B
373 382Right-handed alpha
Helix 19
AC1
C
10 17Right-handed alpha
Helix 20
AC2
C
22 32Right-handed alpha
Helix 21
AC3
C
40 72Right-handed alpha
Helix 22
AC4
D
107 146Right-handed alpha
Helix 23
AC5
D
158 179Right-handed alpha
Helix 24
AC6
D
179 184Right-handed alpha
Helix 25
AC7
D
188 193Right-handed alpha
Helix 26
AC8
D
195 217Right-handed alpha
Helix 27
AC9
D
217 224Right-handed alpha
Helix 28
AD1
D
224 239Right-handed alpha
Helix 29
AD2
D
239 265Right-handed alpha
Helix 30
AD3
D
266 270Right-handed 310
Helix 31
AD4
D
271 295Right-handed alpha
Helix 32
AD5
D
304 311Right-handed alpha
Helix 33
AD6
D
316 339Right-handed alpha
Helix 34
AD7
D
341 350Right-handed alpha
Helix 35
AD8
D
350 363Right-handed alpha
Helix 36
AD9
D
371 382Right-handed alpha
Helix 37
AE1
D
383 386Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 4U6U.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
297 298first strand
Strand 2
D
302 303anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il