Analysis of interatomic Contacts of Structural Units in PDB entry:
4U7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U7P entry

There are 2 chains in PDB entry 4U7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 474VAL 912
B
 PHE 179PHE 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4U7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
474 485Right-handed alpha
Helix 2
AA2
A
489 493Right-handed 310
Helix 3
AA3
A
514 528Right-handed alpha
Helix 4
AA4
A
560 567Right-handed alpha
Helix 5
AA5
A
570 576Right-handed alpha
Helix 6
AA6
A
600 609Right-handed alpha
Helix 7
AA7
A
644 654Right-handed alpha
Helix 8
AA8
A
666 677Right-handed alpha
Helix 9
AA9
A
691 698Right-handed alpha
Helix 10
AB1
A
710 714Right-handed 310
Helix 11
AB2
A
729 740Right-handed alpha
Helix 12
AB3
A
762 774Right-handed alpha
Helix 13
AB4
A
783 785Right-handed 310
Helix 14
AB5
A
814 818Right-handed 310
Helix 15
AB6
A
860 869Right-handed alpha
Helix 16
AB7
A
881 891Right-handed alpha
Helix 17
AB8
A
894 902Right-handed alpha
Helix 18
AB9
A
903 906Right-handed 310
Helix 19
AC1
B
183 187Right-handed 310
Helix 20
AC2
B
199 206Right-handed alpha
Helix 21
AC3
B
223 227Right-handed 310
Helix 22
AC4
B
228 235Right-handed alpha
Helix 23
AC5
B
255 271Right-handed alpha
Helix 24
AC6
B
291 302Right-handed alpha
Helix 25
AC7
B
339 350Right-handed alpha
Helix 26
AC8
B
361 366Right-handed alpha
Helix 27
AC9
B
367 374Right-handed 310
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There are 6 sheets in PDB entry 4U7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 505first strand
Strand 2
A
512 513anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 548first strand
Strand 2
A
557 559anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
595 596anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 684first strand
Strand 2
A
657 663parallel
Strand 3
A
634 639parallel
Strand 4
A
703 707parallel
Strand 5
A
752 758parallel
Strand 6
A
791 796anti-parallel
Strand 7
A
778 781anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 825first strand
Strand 2
A
850 851anti-parallel
Strand 3
A
856 857anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 221first strand
Strand 2
B
192 195parallel
Strand 3
B
240 244parallel
Strand 4
B
281 286parallel
Strand 5
B
317 325anti-parallel
Strand 6
B
307 312anti-parallel
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