Analysis of interatomic Contacts of Structural Units in PDB entry:
4U8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U8E entry

There are 2 chains in PDB entry 4U8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 71
A
 GLY 73ASP 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4U8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 13Right-handed 310
Helix 2
AA2
A
14 30Right-handed alpha
Helix 3
AA3
A
48 62Right-handed alpha
Helix 4
AA4
A
75 83Right-handed alpha
Helix 5
AA5
A
95 106Right-handed alpha
Helix 6
AA6
A
122 135Right-handed alpha
Helix 7
AA7
A
144 146Right-handed 310
Helix 8
AA8
A
147 166Right-handed alpha
Helix 9
AA9
A
168 176Right-handed alpha
Helix 10
AB1
A
177 185Right-handed alpha
Helix 11
AB2
A
189 198Right-handed alpha
Helix 12
AB3
A
200 212Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4U8E.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
2 5parallel
Strand 3
A
67 72parallel
Strand 4
A
110 114parallel
Strand 5
A
90 92parallel
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