Analysis of interatomic Contacts of Structural Units in PDB entry:
4UAQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UAQ entry

There is 1 chain in PDB entry 4UAQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28LEU 763
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4UAQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 38Right-handed alpha
Helix 2
AA2
A
41 48Right-handed alpha
Helix 3
AA3
A
49 59Right-handed alpha
Helix 4
AA4
A
70 85Right-handed alpha
Helix 5
AA5
A
91 103Right-handed alpha
Helix 6
AA6
A
114 129Right-handed alpha
Helix 7
AA7
A
139 156Right-handed alpha
Helix 8
AA8
A
169 179Right-handed alpha
Helix 9
AA9
A
185 196Right-handed alpha
Helix 10
AB1
A
197 199Right-handed 310
Helix 11
AB2
A
201 205Right-handed 310
Helix 12
AB3
A
217 224Right-handed alpha
Helix 13
AB4
A
242 255Right-handed alpha
Helix 14
AB5
A
274 285Right-handed alpha
Helix 15
AB6
A
292 297Right-handed alpha
Helix 16
AB7
A
298 312Right-handed alpha
Helix 17
AB8
A
345 352Right-handed alpha
Helix 18
AB9
A
370 375Right-handed alpha
Helix 19
AC1
A
387 389Right-handed 310
Helix 20
AC2
A
390 399Right-handed alpha
Helix 21
AC3
A
423 441Right-handed alpha
Helix 22
AC4
A
451 466Right-handed alpha
Helix 23
AC5
A
476 485Right-handed alpha
Helix 24
AC6
A
515 522Right-handed alpha
Helix 25
AC7
A
535 545Right-handed alpha
Helix 26
AC8
A
546 551Right-handed 310
Helix 27
AC9
A
571 575Right-handed 310
Helix 28
AD1
A
590 633Right-handed alpha
Helix 29
AD2
A
637 643Right-handed alpha
Helix 30
AD3
A
659 695Right-handed alpha
Helix 31
AD4
A
696 698Right-handed 310
Helix 32
AD5
A
705 717Right-handed alpha
Helix 33
AD6
A
718 731Right-handed alpha
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There are 5 sheets in PDB entry 4UAQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
181 184parallel
Strand 3
A
133 136parallel
Strand 4
A
212 216parallel
Strand 5
A
379 384parallel
Strand 6
A
106 108parallel
Strand 7
A
402 404parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 369first strand
Strand 2
A
229 235anti-parallel
Strand 3
A
753 757anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
272 273anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
553 560parallel
Strand 3
A
419 421parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
553 560parallel
Strand 3
A
525 529parallel
Strand 4
A
445 449parallel
Strand 5
A
493 497parallel
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