Analysis of interatomic Contacts of Structural Units in PDB entry:
4UAV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UAV entry

There is 1 chain in PDB entry 4UAV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 74SER 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4UAV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 94Right-handed alpha
Helix 2
AA2
A
94 106Right-handed alpha
Helix 3
AA3
A
113 121Right-handed alpha
Helix 4
AA4
A
125 138Right-handed alpha
Helix 5
AA5
A
146 171Right-handed alpha
Helix 6
AA6
A
179 190Right-handed alpha
Helix 7
AA7
A
201 213Right-handed alpha
Helix 8
AA8
A
214 219Right-handed alpha
Helix 9
AA9
A
225 229Right-handed 310
Helix 10
AB1
A
236 247Right-handed alpha
Helix 11
AB2
A
249 251Right-handed 310
Helix 12
AB3
A
259 269Right-handed alpha
Helix 13
AB4
A
305 313Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 4UAV.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 224first strand
Strand 2
A
193 197parallel
Strand 3
A
78 81parallel
Strand 4
A
253 257parallel
Strand 5
A
272 276parallel
Strand 6
A
291 293parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il