Analysis of interatomic Contacts of Structural Units in PDB entry:
4UC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UC9 entry

There are 4 chains in PDB entry 4UC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32GLY 252
B
 SER 32GLY 252
C
 SER 32LEU 253
D
 SER 32GLY 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 4UC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 39Right-handed 310
Helix 2
2
A
40 54Right-handed alpha
Helix 3
3
A
61 75Right-handed alpha
Helix 4
4
A
75 86Right-handed alpha
Helix 5
5
A
120 143Right-handed alpha
Helix 6
6
A
146 150Right-handed 310
Helix 7
7
A
155 170Right-handed alpha
Helix 8
8
A
171 174Right-handed 310
Helix 9
9
A
178 190Right-handed alpha
Helix 10
10
A
190 197Right-handed alpha
Helix 11
11
A
201 216Right-handed alpha
Helix 12
12
A
217 231Right-handed alpha
Helix 13
13
A
237 249Right-handed alpha
Helix 14
14
B
37 39Right-handed 310
Helix 15
15
B
40 54Right-handed alpha
Helix 16
16
B
61 75Right-handed alpha
Helix 17
17
B
75 86Right-handed alpha
Helix 18
18
B
120 143Right-handed alpha
Helix 19
19
B
146 150Right-handed 310
Helix 20
20
B
155 171Right-handed alpha
Helix 21
21
B
178 190Right-handed alpha
Helix 22
22
B
190 197Right-handed alpha
Helix 23
23
B
201 216Right-handed alpha
Helix 24
24
B
217 231Right-handed alpha
Helix 25
25
B
237 250Right-handed alpha
Helix 26
26
C
37 39Right-handed 310
Helix 27
27
C
40 54Right-handed alpha
Helix 28
28
C
61 75Right-handed alpha
Helix 29
29
C
75 86Right-handed alpha
Helix 30
30
C
120 143Right-handed alpha
Helix 31
31
C
146 150Right-handed 310
Helix 32
32
C
155 170Right-handed alpha
Helix 33
33
C
171 174Right-handed 310
Helix 34
34
C
178 190Right-handed alpha
Helix 35
35
C
190 197Right-handed alpha
Helix 36
36
C
201 216Right-handed alpha
Helix 37
37
C
217 232Right-handed alpha
Helix 38
38
C
237 249Right-handed alpha
Helix 39
39
D
37 39Right-handed 310
Helix 40
40
D
40 54Right-handed alpha
Helix 41
41
D
61 75Right-handed alpha
Helix 42
42
D
75 86Right-handed alpha
Helix 43
43
D
120 143Right-handed alpha
Helix 44
44
D
146 150Right-handed 310
Helix 45
45
D
155 171Right-handed alpha
Helix 46
46
D
178 190Right-handed alpha
Helix 47
47
D
190 197Right-handed alpha
Helix 48
48
D
201 216Right-handed alpha
Helix 49
49
D
217 232Right-handed alpha
Helix 50
50
D
237 249Right-handed alpha
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There are 8 sheets in PDB entry 4UC9. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
92 94parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 102first strand
Strand 2
A
109 114anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 34first strand
Strand 2
B
92 93parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 104first strand
Strand 2
B
107 114anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 34first strand
Strand 2
C
92 93parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 103first strand
Strand 2
C
108 114anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 34first strand
Strand 2
D
92 93parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
97 101first strand
Strand 2
D
110 114anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il