Analysis of interatomic Contacts of Structural Units in PDB entry:
4UCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UCV entry

There is 1 chain in PDB entry 4UCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4UCV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 24Right-handed alpha
Helix 2
2
A
31 49Right-handed alpha
Helix 3
3
A
50 53Right-handed 310
Helix 4
4
A
87 102Right-handed alpha
Helix 5
5
A
146 151Right-handed alpha
Helix 6
6
A
178 192Right-handed alpha
Helix 7
7
A
199 209Right-handed alpha
Helix 8
8
A
212 219Right-handed alpha
Helix 9
9
A
239 250Right-handed alpha
Helix 10
10
A
263 278Right-handed alpha
Helix 11
11
A
279 281Right-handed 310
Helix 12
12
A
294 302Right-handed alpha
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There are 3 sheets in PDB entry 4UCV. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
142 144anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 262first strand
Strand 2
A
110 117anti-parallel
Strand 3
A
285 292anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 136first strand
Strand 2
A
120 127anti-parallel
Strand 3
A
168 176anti-parallel
Strand 4
A
222 232anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il