Analysis of interatomic Contacts of Structural Units in PDB entry:
4UED


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UED entry

There are 2 chains in PDB entry 4UED (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 33VAL 217
B
 MET 49SER 83
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4UED. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 59Right-handed alpha
Helix 2
2
A
69 78Right-handed alpha
Helix 3
3
A
126 138Right-handed alpha
Helix 4
4
A
173 187Right-handed alpha
Helix 5
5
A
200 203Right-handed alpha
Helix 6
6
B
56 62Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4UED.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 68first strand
Strand 2
A
38 49anti-parallel
Strand 3
A
89 95anti-parallel
Strand 4
A
149 156anti-parallel
Strand 5
A
161 167anti-parallel
Strand 6
A
111 117anti-parallel
Strand 7
A
196 199anti-parallel
Strand 8
A
215 216anti-parallel
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