Analysis of interatomic Contacts of Structural Units in PDB entry:
4UEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UEY entry

There are 3 chains in PDB entry 4UEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 48ARG 187
B
 THR 47LYS 186
C
 THR 47LYS 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 4UEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 62Right-handed alpha
Helix 2
2
A
102 109Right-handed alpha
Helix 3
3
A
111 116Right-handed 310
Helix 4
4
A
126 133Right-handed alpha
Helix 5
5
A
136 150Right-handed alpha
Helix 6
6
A
182 186Right-handed 310
Helix 7
7
B
48 62Right-handed alpha
Helix 8
8
B
102 107Right-handed alpha
Helix 9
9
B
110 116Right-handed 310
Helix 10
10
B
126 133Right-handed alpha
Helix 11
11
B
138 150Right-handed alpha
Helix 12
12
B
182 186Right-handed 310
Helix 13
13
C
48 62Right-handed alpha
Helix 14
14
C
102 107Right-handed alpha
Helix 15
15
C
110 116Right-handed 310
Helix 16
16
C
126 133Right-handed alpha
Helix 17
17
C
138 150Right-handed alpha
Helix 18
18
C
182 186Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4UEY. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
69 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
84 90anti-parallel
Strand 3
A
173 179anti-parallel
Strand 4
A
154 164anti-parallel
Strand 5
A
118 125anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 66first strand
Strand 2
B
69 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
84 90anti-parallel
Strand 3
B
173 179anti-parallel
Strand 4
B
154 164anti-parallel
Strand 5
B
118 125anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 66first strand
Strand 2
C
69 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 98first strand
Strand 2
C
84 90anti-parallel
Strand 3
C
173 179anti-parallel
Strand 4
C
154 164anti-parallel
Strand 5
C
118 125anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il