Analysis of interatomic Contacts of Structural Units in PDB entry:
4UF7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UF7 entry

There are 4 chains in PDB entry 4UF7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 201HIS 617
B
 PRO 202HIS 617
C
 SER 30GLY 171
E
 SER 30THR 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4UF7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
255 259Right-handed 310
Helix 2
2
A
291 293Right-handed 310
Helix 3
3
A
318 323Right-handed alpha
Helix 4
4
A
324 327Right-handed 310
Helix 5
5
A
349 351Right-handed 310
Helix 6
6
A
400 408Right-handed alpha
Helix 7
7
A
482 485Right-handed 310
Helix 8
8
B
255 259Right-handed 310
Helix 9
9
B
291 293Right-handed 310
Helix 10
10
B
318 323Right-handed alpha
Helix 11
11
B
324 327Right-handed 310
Helix 12
12
B
349 351Right-handed 310
Helix 13
13
B
400 408Right-handed alpha
Helix 14
14
B
482 485Right-handed 310
Helix 15
15
C
85 91Right-handed alpha
Helix 16
16
C
144 148Right-handed 310
Helix 17
17
C
153 159Right-handed alpha
Helix 18
18
E
85 91Right-handed alpha
Helix 19
19
E
144 148Right-handed 310
Helix 20
20
E
153 159Right-handed alpha
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There are 24 sheets in PDB entry 4UF7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, CA, EA, EB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
601 607anti-parallel
Strand 3
A
581 592anti-parallel
Strand 4
A
597 598parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
601 607anti-parallel
Strand 3
A
581 592anti-parallel
Strand 4
A
565 578anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 598first strand
Strand 2
A
581 592parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 241first strand
Strand 2
A
244 253anti-parallel
Strand 3
A
261 273anti-parallel
Strand 4
A
279 282anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
C
31 37parallel
Strand 3
C
60 65parallel
Strand 4
C
111 116anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 302first strand
Strand 2
A
306 313anti-parallel
Strand 3
A
329 336anti-parallel
Strand 4
A
342 347anti-parallel
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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
435 440parallel
Strand 3
A
419 427anti-parallel
Strand 4
A
373 382anti-parallel
Strand 5
A
368 370parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
435 440parallel
Strand 3
A
419 427anti-parallel
Strand 4
A
373 382anti-parallel
Strand 5
A
357 362anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
373 382parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 366first strand
Strand 2
A
452 457parallel
Strand 3
A
460 465anti-parallel
Strand 4
A
475 481anti-parallel
Strand 5
A
486 489anti-parallel
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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
521 523first strand
Strand 2
A
531 536anti-parallel
Strand 3
A
545 550anti-parallel
Strand 4
A
555 560anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 219first strand
Strand 2
B
601 607anti-parallel
Strand 3
B
581 592anti-parallel
Strand 4
B
597 598parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 219first strand
Strand 2
B
601 607anti-parallel
Strand 3
B
581 592anti-parallel
Strand 4
B
565 578anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
597 598first strand
Strand 2
B
581 592parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 241first strand
Strand 2
B
244 253anti-parallel
Strand 3
B
261 273anti-parallel
Strand 4
B
279 282anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
295 302first strand
Strand 2
B
307 313anti-parallel
Strand 3
B
329 335anti-parallel
Strand 4
B
342 347anti-parallel
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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 353first strand
Strand 2
B
435 440parallel
Strand 3
B
419 427anti-parallel
Strand 4
B
373 382anti-parallel
Strand 5
B
368 370parallel
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There are 5 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 353first strand
Strand 2
B
435 440parallel
Strand 3
B
419 427anti-parallel
Strand 4
B
373 382anti-parallel
Strand 5
B
357 362anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 370first strand
Strand 2
B
373 382parallel
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There are 5 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 366first strand
Strand 2
B
452 457parallel
Strand 3
B
460 465anti-parallel
Strand 4
B
475 481anti-parallel
Strand 5
B
486 489anti-parallel
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There are 4 strands in BJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
521 523first strand
Strand 2
B
531 536anti-parallel
Strand 3
B
545 550anti-parallel
Strand 4
B
555 560anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 53first strand
Strand 2
C
162 167parallel
Strand 3
C
133 138anti-parallel
Strand 4
C
79 84anti-parallel
Strand 5
C
102 104anti-parallel
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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
31 37first strand
Strand 2
E
59 65parallel
Strand 3
E
111 116anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 53first strand
Strand 2
E
162 167parallel
Strand 3
E
133 138anti-parallel
Strand 4
E
79 84anti-parallel
Strand 5
E
102 104anti-parallel
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