Analysis of interatomic Contacts of Structural Units in PDB entry:
4UFH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UFH entry

There is 1 chain in PDB entry 4UFH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 25ARG 668
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4UFH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 72Right-handed alpha
Helix 2
2
A
113 125Right-handed alpha
Helix 3
3
A
138 143Right-handed 310
Helix 4
4
A
151 171Right-handed alpha
Helix 5
5
A
186 200Right-handed alpha
Helix 6
6
A
216 224Right-handed alpha
Helix 7
7
A
224 231Right-handed alpha
Helix 8
8
A
244 251Right-handed alpha
Helix 9
9
A
265 284Right-handed alpha
Helix 10
10
A
323 333Right-handed alpha
Helix 11
11
A
372 376Right-handed 310
Helix 12
12
A
399 402Right-handed 310
Helix 13
13
A
568 574Right-handed 310
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There are 8 sheets in PDB entry 4UFH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
391 397parallel
Strand 3
A
437 442anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
340 342anti-parallel
Strand 3
A
353 358anti-parallel
Strand 4
A
364 369anti-parallel
Strand 5
A
446 451anti-parallel
Strand 6
A
406 413anti-parallel
Strand 7
A
421 430anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
340 342anti-parallel
Strand 3
A
353 358anti-parallel
Strand 4
A
346 347parallel
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There are 9 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 46first strand
Strand 2
A
287 291parallel
Strand 3
A
253 260parallel
Strand 4
A
233 237parallel
Strand 5
A
206 212parallel
Strand 6
A
176 177parallel
Strand 7
A
129 134parallel
Strand 8
A
81 86parallel
Strand 9
A
41 46parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 476first strand
Strand 2
A
657 667parallel
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There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 502first strand
Strand 2
A
511 515anti-parallel
Strand 3
A
657 667anti-parallel
Strand 4
A
542 551anti-parallel
Strand 5
A
612 620anti-parallel
Strand 6
A
623 628anti-parallel
Strand 7
A
631 638anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 502first strand
Strand 2
A
511 515anti-parallel
Strand 3
A
657 667anti-parallel
Strand 4
A
473 476parallel
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There are 7 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 495first strand
Strand 2
A
531 535anti-parallel
Strand 3
A
646 651anti-parallel
Strand 4
A
558 565anti-parallel
Strand 5
A
576 583anti-parallel
Strand 6
A
587 593anti-parallel
Strand 7
A
599 604anti-parallel
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