Analysis of interatomic Contacts of Structural Units in PDB entry:
4UFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UFS entry

There are 3 chains in PDB entry 4UFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 31PRO 543
B
 ILE 39CYS 141
C
 LYS 53LEU 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4UFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
178 183Right-handed alpha
Helix 2
2
A
250 256Right-handed 310
Helix 3
3
A
346 351Right-handed alpha
Helix 4
4
A
391 395Right-handed 310
Helix 5
5
A
415 419Right-handed 310
Helix 6
6
A
475 481Right-handed alpha
Helix 7
7
C
99 103Right-handed 310
Helix 8
8
C
125 129Right-handed 310
Helix 9
9
C
135 146Right-handed alpha
Helix 10
10
C
159 166Right-handed alpha
Helix 11
11
C
182 195Right-handed alpha
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There are 11 sheets in PDB entry 4UFS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA,

There are 12 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
48 51anti-parallel
Strand 3
A
68 72parallel
Strand 4
A
94 96parallel
Strand 5
A
118 120parallel
Strand 6
A
142 144parallel
Strand 7
A
166 168parallel
Strand 8
A
190 192parallel
Strand 9
A
214 216parallel
Strand 10
A
238 240parallel
Strand 11
A
261 263parallel
Strand 12
A
285 287parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
224 225parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
295 296parallel
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There are 9 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 313first strand
Strand 2
A
332 336parallel
Strand 3
A
356 358parallel
Strand 4
A
378 380parallel
Strand 5
A
402 404parallel
Strand 6
A
426 428parallel
Strand 7
A
447 449parallel
Strand 8
A
470 472parallel
Strand 9
A
540 542parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
412 413parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 47first strand
Strand 2
B
51 55anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 66first strand
Strand 2
B
69 75anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
92 95anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 106first strand
Strand 2
B
109 113anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 120first strand
Strand 2
B
123 125anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 65first strand
Strand 2
C
71 83anti-parallel
Strand 3
C
177 180anti-parallel
Strand 4
C
150 154parallel
Strand 5
C
117 122parallel
Strand 6
C
91 97parallel
Strand 7
C
199 204anti-parallel
Strand 8
C
55 65anti-parallel
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