Analysis of interatomic Contacts of Structural Units in PDB entry:
4UHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UHO entry

There is 1 chain in PDB entry 4UHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14ALA 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4UHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
26 33Right-handed alpha
Helix 3
3
A
57 62Right-handed alpha
Helix 4
4
A
69 83Right-handed alpha
Helix 5
5
A
93 105Right-handed alpha
Helix 6
6
A
119 138Right-handed alpha
Helix 7
7
A
157 164Right-handed alpha
Helix 8
8
A
166 171Right-handed alpha
Helix 9
9
A
200 216Right-handed alpha
Helix 10
10
A
240 253Right-handed alpha
Helix 11
11
A
272 278Right-handed alpha
Helix 12
12
A
287 292Right-handed 310
Helix 13
13
A
304 312Right-handed alpha
Helix 14
14
A
331 348Right-handed alpha
Helix 15
15
A
349 367Right-handed alpha
Helix 16
16
A
396 410Right-handed alpha
Helix 17
17
A
429 446Right-handed alpha
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There are 3 sheets in PDB entry 4UHO. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
411 412parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 117first strand
Strand 2
A
298 303anti-parallel
Strand 3
A
283 286anti-parallel
Strand 4
A
255 259parallel
Strand 5
A
220 225parallel
Strand 6
A
145 149parallel
Strand 7
A
180 182parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 380first strand
Strand 2
A
383 388anti-parallel
Strand 3
A
419 422anti-parallel
Strand 4
A
414 416anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il