Analysis of interatomic Contacts of Structural Units in PDB entry:
4UIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UIE entry

There is 1 chain in PDB entry 4UIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 759SER 1099
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4UIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
775 779Right-handed 310
Helix 2
2
A
782 789Right-handed alpha
Helix 3
3
A
810 819Right-handed alpha
Helix 4
4
A
836 840Right-handed 310
Helix 5
5
A
883 886Right-handed 310
Helix 6
6
A
979 983Right-handed 310
Helix 7
7
A
1043 1050Right-handed alpha
Helix 8
8
A
1089 1092Right-handed 310
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There are 7 sheets in PDB entry 4UIE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 767first strand
Strand 2
A
790 793anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
771 773first strand
Strand 2
A
872 878parallel
Strand 3
A
855 863anti-parallel
Strand 4
A
820 825anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 895first strand
Strand 2
A
902 906anti-parallel
Strand 3
A
950 952anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
942 944first strand
Strand 2
A
916 922anti-parallel
Strand 3
A
958 964anti-parallel
Strand 4
A
970 977anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
995 999first strand
Strand 2
A
1008 1014anti-parallel
Strand 3
A
1060 1062anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1001 1005first strand
Strand 2
A
1094 1096parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1052 1053first strand
Strand 2
A
1021 1024anti-parallel
Strand 3
A
1068 1074anti-parallel
Strand 4
A
1080 1087anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il