Analysis of interatomic Contacts of Structural Units in PDB entry:
4UIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UIL entry

There are 2 chains in PDB entry 4UIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 ALA 1ARG 222
L
 ASP 1GLU 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 4UIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
H
28 32Right-handed 310
Helix 2
2
H
87 91Right-handed 310
Helix 3
3
H
195 200Right-handed alpha
Helix 4
4
L
79 83Right-handed 310
Helix 5
5
L
121 126Right-handed alpha
Helix 6
6
L
183 187Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 4UIL. Click on sheet of interest to get list of strands forming it: HA, HB, HC, HD, HE, HF, HG, HH, HI, LA, LB, LC, LD,

There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
22 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
22 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
18 19parallel
Back to list of sheets
Back to top of page

There are 2 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
68 73first strand
Strand 2
H
78 83anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120anti-parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
109 112anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in HE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120anti-parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in HF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
109 112first strand
Strand 2
H
92 99anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in HG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 133first strand
Strand 2
H
144 150anti-parallel
Strand 3
H
187 193anti-parallel
Strand 4
H
173 174anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in HH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
160 162first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in HI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 179first strand
Strand 2
H
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 6first strand
Strand 2
L
19 24anti-parallel
Strand 3
L
70 75anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
44 49anti-parallel
Strand 3
L
33 38anti-parallel
Strand 4
L
85 90anti-parallel
Strand 5
L
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
129 139anti-parallel
Strand 3
L
173 182anti-parallel
Strand 4
L
159 163anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 155first strand
Strand 2
L
145 149anti-parallel
Strand 3
L
191 197anti-parallel
Strand 4
L
205 210anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il