Analysis of interatomic Contacts of Structural Units in PDB entry:
4UJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UJ6 entry

There is 1 chain in PDB entry 4UJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31LEU 774
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4UJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 60Right-handed alpha
Helix 2
2
A
64 90Right-handed alpha
Helix 3
3
A
92 109Right-handed alpha
Helix 4
4
A
119 148Right-handed alpha
Helix 5
5
A
149 166Right-handed alpha
Helix 6
6
A
168 173Right-handed alpha
Helix 7
7
A
176 187Right-handed alpha
Helix 8
8
A
188 197Right-handed alpha
Helix 9
9
A
198 217Right-handed alpha
Helix 10
10
A
221 234Right-handed alpha
Helix 11
11
A
235 237Right-handed 310
Helix 12
12
A
241 259Right-handed alpha
Helix 13
13
A
289 291Right-handed 310
Helix 14
14
A
607 610Right-handed 310
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There are 15 sheets in PDB entry 4UJ6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
274 279anti-parallel
Strand 3
A
317 322anti-parallel
Strand 4
A
306 311anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
293 297anti-parallel
Strand 3
A
331 336anti-parallel
Strand 4
A
350 355anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 366first strand
Strand 2
A
383 386anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 371first strand
Strand 2
A
433 441parallel
Strand 3
A
420 427anti-parallel
Strand 4
A
399 403anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 378first strand
Strand 2
A
412 413anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 472first strand
Strand 2
A
459 464anti-parallel
Strand 3
A
446 456anti-parallel
Strand 4
A
483 491anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 510first strand
Strand 2
A
530 538anti-parallel
Strand 3
A
541 549anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 518first strand
Strand 2
A
524 526anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 560first strand
Strand 2
A
572 581anti-parallel
Strand 3
A
614 621anti-parallel
Strand 4
A
601 605anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 568first strand
Strand 2
A
636 645parallel
Strand 3
A
627 633anti-parallel
Strand 4
A
592 595anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
652 656first strand
Strand 2
A
677 683anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 692first strand
Strand 2
A
677 683parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 718first strand
Strand 2
A
721 726anti-parallel
Strand 3
A
677 683anti-parallel
Strand 4
A
689 692parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 718first strand
Strand 2
A
721 726anti-parallel
Strand 3
A
677 683anti-parallel
Strand 4
A
652 656anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 701first strand
Strand 2
A
738 743anti-parallel
Strand 3
A
746 754anti-parallel
Strand 4
A
761 764anti-parallel
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