Analysis of interatomic Contacts of Structural Units in PDB entry:
4UMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UMG entry

There is 1 chain in PDB entry 4UMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 691GLY 820
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 4UMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
694 698Right-handed 310
Helix 2
2
A
703 705Right-handed 310
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There are 4 sheets in PDB entry 4UMG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
699 700first strand
Strand 2
A
714 719anti-parallel
Strand 3
A
784 789anti-parallel
Strand 4
A
776 779anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 709first strand
Strand 2
A
813 818parallel
Strand 3
A
795 803anti-parallel
Strand 4
A
806 807parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 709first strand
Strand 2
A
813 818parallel
Strand 3
A
795 803anti-parallel
Strand 4
A
761 766anti-parallel
Strand 5
A
772 773anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
806 807first strand
Strand 2
A
795 803parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il