Analysis of interatomic Contacts of Structural Units in PDB entry:
4UMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UMS entry

There is 1 chain in PDB entry 4UMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1039HIS 1192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 4UMS. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1098 1102Right-handed alpha
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There are 4 sheets in PDB entry 4UMS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1085 1092first strand
Strand 2
A
1131 1140anti-parallel
Strand 3
A
1056 1064anti-parallel
Strand 4
A
1041 1046anti-parallel
Strand 5
A
1171 1175parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1052first strand
Strand 2
A
1177 1182parallel
Strand 3
A
1147 1162anti-parallel
Strand 4
A
1167 1169parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1052first strand
Strand 2
A
1177 1182parallel
Strand 3
A
1147 1162anti-parallel
Strand 4
A
1073 1079anti-parallel
Strand 5
A
1112 1118anti-parallel
Strand 6
A
1103 1106anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1167 1169first strand
Strand 2
A
1147 1162parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il