Analysis of interatomic Contacts of Structural Units in PDB entry:
4UOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UOF entry

There are 3 chains in PDB entry 4UOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 151
B
 MET 1GLU 151
C
 MET 1GLU 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4UOF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 17Right-handed alpha
Helix 2
2
A
19 31Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
52 55Right-handed 310
Helix 5
5
A
59 67Right-handed alpha
Helix 6
6
A
81 91Right-handed alpha
Helix 7
7
A
94 98Right-handed 310
Helix 8
8
A
102 108Right-handed alpha
Helix 9
9
A
110 114Right-handed 310
Helix 10
10
A
121 133Right-handed alpha
Helix 11
11
A
134 138Right-handed 310
Helix 12
12
A
145 150Right-handed alpha
Helix 13
13
B
11 17Right-handed alpha
Helix 14
14
B
19 31Right-handed alpha
Helix 15
15
B
43 51Right-handed alpha
Helix 16
16
B
52 55Right-handed 310
Helix 17
17
B
59 67Right-handed alpha
Helix 18
18
B
81 91Right-handed alpha
Helix 19
19
B
94 98Right-handed 310
Helix 20
20
B
102 108Right-handed alpha
Helix 21
21
B
110 114Right-handed 310
Helix 22
22
B
121 133Right-handed alpha
Helix 23
23
B
134 138Right-handed 310
Helix 24
24
B
145 150Right-handed alpha
Helix 25
25
C
11 17Right-handed alpha
Helix 26
26
C
19 31Right-handed alpha
Helix 27
27
C
43 51Right-handed alpha
Helix 28
28
C
52 55Right-handed 310
Helix 29
29
C
59 68Right-handed alpha
Helix 30
30
C
81 91Right-handed alpha
Helix 31
31
C
94 98Right-handed 310
Helix 32
32
C
102 108Right-handed alpha
Helix 33
33
C
121 133Right-handed alpha
Helix 34
34
C
134 138Right-handed 310
Helix 35
35
C
145 150Right-handed alpha
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There are 3 sheets in PDB entry 4UOF. Click on sheet of interest to get list of strands forming it: AA, BA, CA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 40first strand
Strand 2
A
72 78anti-parallel
Strand 3
A
5 10anti-parallel
Strand 4
A
116 118anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 40first strand
Strand 2
B
72 78anti-parallel
Strand 3
B
5 10anti-parallel
Strand 4
B
116 118anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 40first strand
Strand 2
C
72 78anti-parallel
Strand 3
C
5 10anti-parallel
Strand 4
C
116 118anti-parallel
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