Analysis of interatomic Contacts of Structural Units in PDB entry:
4UOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UOY entry

There are 4 chains in PDB entry 4UOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7LEU 460
B
 ALA 8ALA 459
C
 ALA 8ALA 459
D
 ALA 8ALA 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 4UOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
27 46Right-handed alpha
Helix 3
3
A
47 56Right-handed alpha
Helix 4
4
A
59 65Right-handed 310
Helix 5
5
A
88 93Right-handed alpha
Helix 6
6
A
100 114Right-handed alpha
Helix 7
7
A
123 137Right-handed alpha
Helix 8
8
A
149 166Right-handed alpha
Helix 9
9
A
184 189Right-handed alpha
Helix 10
10
A
193 198Right-handed alpha
Helix 11
11
A
199 201Right-handed 310
Helix 12
12
A
214 228Right-handed alpha
Helix 13
13
A
252 265Right-handed alpha
Helix 14
14
A
284 288Right-handed 310
Helix 15
15
A
299 304Right-handed 310
Helix 16
16
A
316 320Right-handed alpha
Helix 17
17
A
321 323Right-handed 310
Helix 18
18
A
336 353Right-handed alpha
Helix 19
19
A
354 377Right-handed alpha
Helix 20
20
A
397 411Right-handed alpha
Helix 21
21
A
434 460Right-handed alpha
Helix 22
22
B
9 23Right-handed alpha
Helix 23
23
B
27 46Right-handed alpha
Helix 24
24
B
47 56Right-handed alpha
Helix 25
25
B
59 65Right-handed 310
Helix 26
26
B
88 93Right-handed alpha
Helix 27
27
B
100 112Right-handed alpha
Helix 28
28
B
123 137Right-handed alpha
Helix 29
29
B
149 166Right-handed alpha
Helix 30
30
B
167 169Right-handed 310
Helix 31
31
B
186 191Right-handed alpha
Helix 32
32
B
193 198Right-handed alpha
Helix 33
33
B
199 201Right-handed 310
Helix 34
34
B
214 229Right-handed alpha
Helix 35
35
B
252 265Right-handed alpha
Helix 36
36
B
284 288Right-handed 310
Helix 37
37
B
299 304Right-handed 310
Helix 38
38
B
316 320Right-handed alpha
Helix 39
39
B
321 323Right-handed 310
Helix 40
40
B
336 353Right-handed alpha
Helix 41
41
B
354 377Right-handed alpha
Helix 42
42
B
397 411Right-handed alpha
Helix 43
43
B
434 459Right-handed alpha
Helix 44
44
C
9 23Right-handed alpha
Helix 45
45
C
27 46Right-handed alpha
Helix 46
46
C
47 57Right-handed alpha
Helix 47
47
C
59 65Right-handed 310
Helix 48
48
C
88 93Right-handed alpha
Helix 49
49
C
100 114Right-handed alpha
Helix 50
50
C
123 137Right-handed alpha
Helix 51
51
C
149 166Right-handed alpha
Helix 52
52
C
167 169Right-handed 310
Helix 53
53
C
184 191Right-handed alpha
Helix 54
54
C
193 198Right-handed alpha
Helix 55
55
C
199 201Right-handed 310
Helix 56
56
C
214 228Right-handed alpha
Helix 57
57
C
252 265Right-handed alpha
Helix 58
58
C
284 290Right-handed 310
Helix 59
59
C
299 304Right-handed 310
Helix 60
60
C
316 320Right-handed alpha
Helix 61
61
C
321 323Right-handed 310
Helix 62
62
C
336 353Right-handed alpha
Helix 63
63
C
354 377Right-handed alpha
Helix 64
64
C
397 411Right-handed alpha
Helix 65
65
C
434 459Right-handed alpha
Helix 66
66
D
9 23Right-handed alpha
Helix 67
67
D
27 46Right-handed alpha
Helix 68
68
D
47 57Right-handed alpha
Helix 69
69
D
59 63Right-handed 310
Helix 70
70
D
100 114Right-handed alpha
Helix 71
71
D
123 137Right-handed alpha
Helix 72
72
D
149 166Right-handed alpha
Helix 73
73
D
167 169Right-handed 310
Helix 74
74
D
186 190Right-handed 310
Helix 75
75
D
193 198Right-handed alpha
Helix 76
76
D
199 201Right-handed 310
Helix 77
77
D
214 228Right-handed alpha
Helix 78
78
D
252 265Right-handed alpha
Helix 79
79
D
284 289Right-handed 310
Helix 80
80
D
299 304Right-handed 310
Helix 81
81
D
316 320Right-handed alpha
Helix 82
82
D
321 323Right-handed 310
Helix 83
83
D
336 353Right-handed alpha
Helix 84
84
D
354 377Right-handed alpha
Helix 85
85
D
397 411Right-handed alpha
Helix 86
86
D
434 459Right-handed alpha
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There are 12 sheets in PDB entry 4UOY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
75 78anti-parallel
Strand 3
A
83 86anti-parallel
Strand 4
A
413 414parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 147first strand
Strand 2
A
310 315anti-parallel
Strand 3
A
295 298anti-parallel
Strand 4
A
267 271parallel
Strand 5
A
232 237parallel
Strand 6
A
172 176parallel
Strand 7
A
207 210parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 387first strand
Strand 2
A
390 395anti-parallel
Strand 3
A
421 427anti-parallel
Strand 4
A
416 418anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 72first strand
Strand 2
B
75 78anti-parallel
Strand 3
B
83 86anti-parallel
Strand 4
B
413 414parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 147first strand
Strand 2
B
310 315anti-parallel
Strand 3
B
295 298anti-parallel
Strand 4
B
267 271parallel
Strand 5
B
232 237parallel
Strand 6
B
172 176parallel
Strand 7
B
207 210parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 387first strand
Strand 2
B
390 395anti-parallel
Strand 3
B
421 427anti-parallel
Strand 4
B
416 418anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 70first strand
Strand 2
C
75 78anti-parallel
Strand 3
C
83 86anti-parallel
Strand 4
C
413 414parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
141 147first strand
Strand 2
C
310 315anti-parallel
Strand 3
C
295 298anti-parallel
Strand 4
C
267 271parallel
Strand 5
C
232 237parallel
Strand 6
C
172 176parallel
Strand 7
C
207 210parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
381 387first strand
Strand 2
C
390 395anti-parallel
Strand 3
C
421 427anti-parallel
Strand 4
C
416 418anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 70first strand
Strand 2
D
75 78anti-parallel
Strand 3
D
83 86anti-parallel
Strand 4
D
413 414parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
141 147first strand
Strand 2
D
310 315anti-parallel
Strand 3
D
295 298anti-parallel
Strand 4
D
267 271parallel
Strand 5
D
232 237parallel
Strand 6
D
172 176parallel
Strand 7
D
207 210parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
381 387first strand
Strand 2
D
390 395anti-parallel
Strand 3
D
424 427anti-parallel
Strand 4
D
416 417anti-parallel
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