Analysis of interatomic Contacts of Structural Units in PDB entry:
4UQ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4UQ6 entry

There are 4 chains in PDB entry 4UQ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	CYS 773
B	ASN 10	CYS 773
C	ASN 10	CYS 773
D	ASN 10	CYS 773

There are 92 helices in PDB entry 4UQ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	22	36	Right-handed alpha
Helix 2	2	A	54	68	Right-handed alpha
Helix 3	3	A	81	92	Right-handed alpha
Helix 4	4	A	117	128	Right-handed alpha
Helix 5	5	A	139	142	Right-handed 310
Helix 6	6	A	143	156	Right-handed alpha
Helix 7	7	A	179	184	Right-handed alpha
Helix 8	8	A	197	212	Right-handed alpha
Helix 9	9	A	252	263	Right-handed alpha
Helix 10	10	A	279	301	Right-handed alpha
Helix 11	11	A	324	334	Right-handed alpha
Helix 12	12	A	411	415	Right-handed 310
Helix 13	13	A	416	419	Right-handed 310
Helix 14	14	A	423	436	Right-handed alpha
Helix 15	15	A	461	469	Right-handed alpha
Helix 16	16	A	482	487	Right-handed alpha
Helix 17	17	A	635	640	Right-handed alpha
Helix 18	18	A	653	661	Right-handed alpha
Helix 19	19	A	664	677	Right-handed alpha
Helix 20	20	A	685	696	Right-handed alpha
Helix 21	21	A	706	714	Right-handed alpha
Helix 22	22	A	742	756	Right-handed alpha
Helix 23	23	A	757	768	Right-handed alpha
Helix 24	24	B	22	36	Right-handed alpha
Helix 25	25	B	54	68	Right-handed alpha
Helix 26	26	B	81	92	Right-handed alpha
Helix 27	27	B	117	128	Right-handed alpha
Helix 28	28	B	139	142	Right-handed 310
Helix 29	29	B	143	156	Right-handed alpha
Helix 30	30	B	179	184	Right-handed alpha
Helix 31	31	B	197	212	Right-handed alpha
Helix 32	32	B	252	263	Right-handed alpha
Helix 33	33	B	279	301	Right-handed alpha
Helix 34	34	B	324	334	Right-handed alpha
Helix 35	35	B	411	415	Right-handed 310
Helix 36	36	B	416	419	Right-handed 310
Helix 37	37	B	423	437	Right-handed alpha
Helix 38	38	B	461	469	Right-handed alpha
Helix 39	39	B	482	487	Right-handed alpha
Helix 40	40	B	635	641	Right-handed alpha
Helix 41	41	B	653	662	Right-handed alpha
Helix 42	42	B	664	677	Right-handed alpha
Helix 43	43	B	685	696	Right-handed alpha
Helix 44	44	B	706	714	Right-handed alpha
Helix 45	45	B	742	756	Right-handed alpha
Helix 46	46	B	757	768	Right-handed alpha
Helix 47	47	C	22	36	Right-handed alpha
Helix 48	48	C	54	68	Right-handed alpha
Helix 49	49	C	81	92	Right-handed alpha
Helix 50	50	C	117	128	Right-handed alpha
Helix 51	51	C	139	142	Right-handed 310
Helix 52	52	C	143	156	Right-handed alpha
Helix 53	53	C	179	184	Right-handed alpha
Helix 54	54	C	197	212	Right-handed alpha
Helix 55	55	C	252	263	Right-handed alpha
Helix 56	56	C	279	301	Right-handed alpha
Helix 57	57	C	324	334	Right-handed alpha
Helix 58	58	C	411	415	Right-handed 310
Helix 59	59	C	416	419	Right-handed 310
Helix 60	60	C	423	436	Right-handed alpha
Helix 61	61	C	461	469	Right-handed alpha
Helix 62	62	C	482	487	Right-handed alpha
Helix 63	63	C	635	640	Right-handed alpha
Helix 64	64	C	653	661	Right-handed alpha
Helix 65	65	C	664	677	Right-handed alpha
Helix 66	66	C	685	696	Right-handed alpha
Helix 67	67	C	706	714	Right-handed alpha
Helix 68	68	C	742	756	Right-handed alpha
Helix 69	69	C	757	768	Right-handed alpha
Helix 70	70	D	22	36	Right-handed alpha
Helix 71	71	D	54	68	Right-handed alpha
Helix 72	72	D	81	92	Right-handed alpha
Helix 73	73	D	117	128	Right-handed alpha
Helix 74	74	D	139	142	Right-handed 310
Helix 75	75	D	143	156	Right-handed alpha
Helix 76	76	D	179	184	Right-handed alpha
Helix 77	77	D	197	212	Right-handed alpha
Helix 78	78	D	252	263	Right-handed alpha
Helix 79	79	D	279	301	Right-handed alpha
Helix 80	80	D	324	334	Right-handed alpha
Helix 81	81	D	411	415	Right-handed 310
Helix 82	82	D	416	419	Right-handed 310
Helix 83	83	D	423	437	Right-handed alpha
Helix 84	84	D	461	469	Right-handed alpha
Helix 85	85	D	482	487	Right-handed alpha
Helix 86	86	D	635	641	Right-handed alpha
Helix 87	87	D	653	662	Right-handed alpha
Helix 88	88	D	664	677	Right-handed alpha
Helix 89	89	D	685	696	Right-handed alpha
Helix 90	90	D	706	714	Right-handed alpha
Helix 91	91	D	742	756	Right-handed alpha
Helix 92	92	D	757	768	Right-handed alpha

There are 32 sheets in PDB entry 4UQ6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, BH, CA, CB, CC, CD, CE, CF, CG, CH, A, DB, C, DD, DE, DF, G, DH,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	50	first strand
Strand 2	A	11	19	parallel
Strand 3	A	72	75	parallel
Strand 4	A	95	98	parallel
Strand 5	A	110	112	parallel

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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	132	137	parallel
Strand 3	A	191	195	parallel
Strand 4	A	219	222	parallel
Strand 5	A	241	246	parallel
Strand 6	A	357	363	anti-parallel
Strand 7	A	368	375	anti-parallel
Strand 8	A	379	382	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	343	344	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	444	first strand
Strand 2	A	395	399	parallel
Strand 3	A	474	475	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	408	first strand
Strand 2	A	421	422	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	491	first strand
Strand 2	A	735	737	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	498	first strand
Strand 2	A	730	732	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	648	first strand
Strand 2	A	700	705	parallel
Strand 3	A	500	505	anti-parallel
Strand 4	A	720	723	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	50	first strand
Strand 2	B	11	19	parallel
Strand 3	B	72	75	parallel
Strand 4	B	95	98	parallel
Strand 5	B	110	112	parallel

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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	132	137	parallel
Strand 3	B	191	195	parallel
Strand 4	B	219	222	parallel
Strand 5	B	241	246	parallel
Strand 6	B	357	363	anti-parallel
Strand 7	B	368	375	anti-parallel
Strand 8	B	379	382	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	343	344	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	444	first strand
Strand 2	B	395	399	parallel
Strand 3	B	474	475	parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	421	422	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	491	first strand
Strand 2	B	735	737	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	498	first strand
Strand 2	B	730	732	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	646	648	first strand
Strand 2	B	700	705	parallel
Strand 3	B	500	505	anti-parallel
Strand 4	B	720	723	anti-parallel

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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	50	first strand
Strand 2	C	11	19	parallel
Strand 3	C	72	75	parallel
Strand 4	C	95	98	parallel
Strand 5	C	110	112	parallel

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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	164	first strand
Strand 2	C	132	137	parallel
Strand 3	C	191	195	parallel
Strand 4	C	219	222	parallel
Strand 5	C	241	246	parallel
Strand 6	C	357	363	anti-parallel
Strand 7	C	368	375	anti-parallel
Strand 8	C	379	382	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	343	344	anti-parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	444	first strand
Strand 2	C	395	399	parallel
Strand 3	C	474	475	parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	408	first strand
Strand 2	C	421	422	anti-parallel

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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	491	first strand
Strand 2	C	735	737	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	730	732	anti-parallel

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There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	646	648	first strand
Strand 2	C	700	705	parallel
Strand 3	C	500	505	anti-parallel
Strand 4	C	720	723	anti-parallel

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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	50	first strand
Strand 2	D	11	19	parallel
Strand 3	D	72	75	parallel
Strand 4	D	95	98	parallel
Strand 5	D	110	112	parallel

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There are 8 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	164	first strand
Strand 2	D	132	137	parallel
Strand 3	D	191	195	parallel
Strand 4	D	219	222	parallel
Strand 5	D	241	246	parallel
Strand 6	D	357	363	anti-parallel
Strand 7	D	368	375	anti-parallel
Strand 8	D	379	382	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	340	first strand
Strand 2	D	343	344	anti-parallel

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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	440	444	first strand
Strand 2	D	395	399	parallel
Strand 3	D	474	475	parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	408	first strand
Strand 2	D	421	422	anti-parallel

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There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	491	first strand
Strand 2	D	735	737	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	496	498	first strand
Strand 2	D	730	732	anti-parallel

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There are 4 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	646	648	first strand
Strand 2	D	700	705	parallel
Strand 3	D	500	505	anti-parallel
Strand 4	D	720	723	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4UQ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
4UQ6