Analysis of interatomic Contacts of Structural Units in PDB entry:
4UQQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4UQQ entry

There are 4 chains in PDB entry 4UQQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	ALA 797
B	THR 2	ILE 794
C	THR 2	ALA 797
D	THR 2	ILE 794

There are120 helices in PDB entry 4UQQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	20	36	Right-handed alpha
Helix 2	2	A	56	71	Right-handed alpha
Helix 3	3	A	80	94	Right-handed alpha
Helix 4	4	A	121	136	Right-handed alpha
Helix 5	5	A	148	154	Right-handed alpha
Helix 6	6	A	154	159	Right-handed alpha
Helix 7	7	A	160	163	Right-handed 310
Helix 8	8	A	176	179	Right-handed 310
Helix 9	9	A	180	190	Right-handed alpha
Helix 10	10	A	200	214	Right-handed alpha
Helix 11	11	A	229	232	Right-handed 310
Helix 12	12	A	255	270	Right-handed alpha
Helix 13	13	A	286	305	Right-handed alpha
Helix 14	14	A	324	334	Right-handed alpha
Helix 15	15	A	423	426	Right-handed 310
Helix 16	16	A	430	444	Right-handed alpha
Helix 17	17	A	468	476	Right-handed alpha
Helix 18	18	A	489	494	Right-handed alpha
Helix 19	19	A	520	524	Right-handed 310
Helix 20	20	A	529	539	Right-handed alpha
Helix 21	21	A	610	630	Right-handed alpha
Helix 22	22	A	639	645	Right-handed alpha
Helix 23	23	A	657	666	Right-handed alpha
Helix 24	24	A	668	681	Right-handed alpha
Helix 25	25	A	681	685	Right-handed alpha
Helix 26	26	A	689	700	Right-handed alpha
Helix 27	27	A	708	718	Right-handed alpha
Helix 28	28	A	742	757	Right-handed alpha
Helix 29	29	A	758	768	Right-handed alpha
Helix 30	30	A	787	797	Right-handed alpha
Helix 31	31	B	20	36	Right-handed alpha
Helix 32	32	B	56	71	Right-handed alpha
Helix 33	33	B	80	94	Right-handed alpha
Helix 34	34	B	121	136	Right-handed alpha
Helix 35	35	B	148	154	Right-handed alpha
Helix 36	36	B	154	159	Right-handed alpha
Helix 37	37	B	160	163	Right-handed 310
Helix 38	38	B	176	179	Right-handed 310
Helix 39	39	B	180	190	Right-handed alpha
Helix 40	40	B	200	214	Right-handed alpha
Helix 41	41	B	229	232	Right-handed 310
Helix 42	42	B	255	270	Right-handed alpha
Helix 43	43	B	286	305	Right-handed alpha
Helix 44	44	B	324	335	Right-handed alpha
Helix 45	45	B	423	426	Right-handed 310
Helix 46	46	B	430	444	Right-handed alpha
Helix 47	47	B	468	476	Right-handed alpha
Helix 48	48	B	489	494	Right-handed alpha
Helix 49	49	B	520	524	Right-handed 310
Helix 50	50	B	529	537	Right-handed alpha
Helix 51	51	B	609	630	Right-handed alpha
Helix 52	52	B	639	645	Right-handed alpha
Helix 53	53	B	657	666	Right-handed alpha
Helix 54	54	B	668	681	Right-handed alpha
Helix 55	55	B	681	685	Right-handed alpha
Helix 56	56	B	689	700	Right-handed alpha
Helix 57	57	B	708	718	Right-handed alpha
Helix 58	58	B	742	757	Right-handed alpha
Helix 59	59	B	758	768	Right-handed alpha
Helix 60	60	B	787	794	Right-handed alpha
Helix 61	61	C	20	36	Right-handed alpha
Helix 62	62	C	56	71	Right-handed alpha
Helix 63	63	C	80	94	Right-handed alpha
Helix 64	64	C	121	136	Right-handed alpha
Helix 65	65	C	148	154	Right-handed alpha
Helix 66	66	C	154	159	Right-handed alpha
Helix 67	67	C	160	163	Right-handed 310
Helix 68	68	C	176	179	Right-handed 310
Helix 69	69	C	180	190	Right-handed alpha
Helix 70	70	C	200	214	Right-handed alpha
Helix 71	71	C	229	232	Right-handed 310
Helix 72	72	C	255	270	Right-handed alpha
Helix 73	73	C	286	305	Right-handed alpha
Helix 74	74	C	324	334	Right-handed alpha
Helix 75	75	C	423	426	Right-handed 310
Helix 76	76	C	430	444	Right-handed alpha
Helix 77	77	C	468	476	Right-handed alpha
Helix 78	78	C	489	494	Right-handed alpha
Helix 79	79	C	520	524	Right-handed 310
Helix 80	80	C	529	539	Right-handed alpha
Helix 81	81	C	610	630	Right-handed alpha
Helix 82	82	C	639	645	Right-handed alpha
Helix 83	83	C	657	666	Right-handed alpha
Helix 84	84	C	668	681	Right-handed alpha
Helix 85	85	C	681	685	Right-handed alpha
Helix 86	86	C	689	700	Right-handed alpha
Helix 87	87	C	708	718	Right-handed alpha
Helix 88	88	C	742	757	Right-handed alpha
Helix 89	89	C	758	768	Right-handed alpha
Helix 90	90	C	787	797	Right-handed alpha
Helix 91	91	D	20	36	Right-handed alpha
Helix 92	92	D	56	71	Right-handed alpha
Helix 93	93	D	80	94	Right-handed alpha
Helix 94	94	D	121	136	Right-handed alpha
Helix 95	95	D	148	154	Right-handed alpha
Helix 96	96	D	154	159	Right-handed alpha
Helix 97	97	D	160	163	Right-handed 310
Helix 98	98	D	176	179	Right-handed 310
Helix 99	99	D	180	190	Right-handed alpha
Helix 100	100	D	200	214	Right-handed alpha
Helix 101	101	D	229	232	Right-handed 310
Helix 102	102	D	255	270	Right-handed alpha
Helix 103	103	D	286	305	Right-handed alpha
Helix 104	104	D	324	335	Right-handed alpha
Helix 105	105	D	423	426	Right-handed 310
Helix 106	106	D	430	444	Right-handed alpha
Helix 107	107	D	468	476	Right-handed alpha
Helix 108	108	D	489	494	Right-handed alpha
Helix 109	109	D	520	524	Right-handed 310
Helix 110	110	D	529	536	Right-handed alpha
Helix 111	111	D	609	630	Right-handed alpha
Helix 112	112	D	639	645	Right-handed alpha
Helix 113	113	D	657	666	Right-handed alpha
Helix 114	114	D	668	681	Right-handed alpha
Helix 115	115	D	681	685	Right-handed alpha
Helix 116	116	D	689	700	Right-handed alpha
Helix 117	117	D	708	718	Right-handed alpha
Helix 118	118	D	742	757	Right-handed alpha
Helix 119	119	D	758	768	Right-handed alpha
Helix 120	120	D	787	794	Right-handed alpha

There are 36 sheets in PDB entry 4UQQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI, CA, CB, CC, CD, CE, CF, CG, CH, CI, A, DB, C, DD, DE, DF, G, DH, DI,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	53	first strand
Strand 2	A	3	13	parallel
Strand 3	A	75	76	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	115	120	parallel
Strand 3	A	352	353	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	172	first strand
Strand 2	A	140	145	parallel
Strand 3	A	194	198	parallel
Strand 4	A	222	225	parallel
Strand 5	A	244	249	parallel
Strand 6	A	358	364	anti-parallel
Strand 7	A	367	375	anti-parallel
Strand 8	A	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	339	first strand
Strand 2	A	342	345	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	447	451	first strand
Strand 2	A	402	406	parallel
Strand 3	A	481	482	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	428	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	498	first strand
Strand 2	A	736	738	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	503	505	first strand
Strand 2	A	731	733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	687	first strand
Strand 2	A	650	654	parallel
Strand 3	A	702	707	parallel
Strand 4	A	507	512	anti-parallel
Strand 5	A	721	724	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	53	first strand
Strand 2	B	3	13	parallel
Strand 3	B	75	76	parallel

Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	115	120	parallel
Strand 3	B	352	353	parallel

Back to list of sheets
Back to top of page

There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	172	first strand
Strand 2	B	140	145	parallel
Strand 3	B	194	198	parallel
Strand 4	B	222	225	parallel
Strand 5	B	244	249	parallel
Strand 6	B	358	364	anti-parallel
Strand 7	B	367	375	anti-parallel
Strand 8	B	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	339	first strand
Strand 2	B	342	345	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	447	451	first strand
Strand 2	B	402	406	parallel
Strand 3	B	481	482	parallel

Back to list of sheets
Back to top of page

There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	415	first strand
Strand 2	B	428	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	498	first strand
Strand 2	B	736	738	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	503	505	first strand
Strand 2	B	731	733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	686	687	first strand
Strand 2	B	650	654	parallel
Strand 3	B	702	707	parallel
Strand 4	B	507	512	anti-parallel
Strand 5	B	721	724	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	53	first strand
Strand 2	C	3	13	parallel
Strand 3	C	75	76	parallel

Back to list of sheets
Back to top of page

There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	115	120	parallel
Strand 3	C	352	353	parallel

Back to list of sheets
Back to top of page

There are 8 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	172	first strand
Strand 2	C	140	145	parallel
Strand 3	C	194	198	parallel
Strand 4	C	222	225	parallel
Strand 5	C	244	249	parallel
Strand 6	C	358	364	anti-parallel
Strand 7	C	367	375	anti-parallel
Strand 8	C	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	336	339	first strand
Strand 2	C	342	345	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	447	451	first strand
Strand 2	C	402	406	parallel
Strand 3	C	481	482	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	415	first strand
Strand 2	C	428	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	736	738	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	503	505	first strand
Strand 2	C	731	733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	686	687	first strand
Strand 2	C	650	654	parallel
Strand 3	C	702	707	parallel
Strand 4	C	507	512	anti-parallel
Strand 5	C	721	724	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	53	first strand
Strand 2	D	3	13	parallel
Strand 3	D	75	76	parallel

Back to list of sheets
Back to top of page

There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	115	120	parallel
Strand 3	D	352	353	parallel

Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	172	first strand
Strand 2	D	140	145	parallel
Strand 3	D	194	198	parallel
Strand 4	D	222	225	parallel
Strand 5	D	244	249	parallel
Strand 6	D	358	364	anti-parallel
Strand 7	D	367	375	anti-parallel
Strand 8	D	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	336	339	first strand
Strand 2	D	342	345	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	447	451	first strand
Strand 2	D	402	406	parallel
Strand 3	D	481	482	parallel

Back to list of sheets
Back to top of page

There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	415	first strand
Strand 2	D	428	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	496	498	first strand
Strand 2	D	736	738	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	503	505	first strand
Strand 2	D	731	733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in DI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	686	687	first strand
Strand 2	D	650	654	parallel
Strand 3	D	702	707	parallel
Strand 4	D	507	512	anti-parallel
Strand 5	D	721	724	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4UQQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
4UQQ