Analysis of interatomic Contacts of Structural Units in PDB entry:
4UT1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UT1 entry

There is 1 chain in PDB entry 4UT1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 73SER 627
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4UT1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 101Right-handed alpha
Helix 2
2
A
106 124Right-handed alpha
Helix 3
3
A
127 188Right-handed alpha
Helix 4
4
A
194 210Right-handed alpha
Helix 5
5
A
274 278Right-handed 310
Helix 6
6
A
280 293Right-handed alpha
Helix 7
7
A
293 317Right-handed alpha
Helix 8
8
A
423 428Right-handed alpha
Helix 9
9
A
434 438Right-handed 310
Helix 10
10
A
565 574Right-handed alpha
Helix 11
11
A
575 577Right-handed 310
Helix 12
12
A
586 625Right-handed alpha
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There are 9 sheets in PDB entry 4UT1. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
222 227anti-parallel
Strand 3
A
232 235anti-parallel
Strand 4
A
238 246anti-parallel
Strand 5
A
254 261anti-parallel
Strand 6
A
271 272anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
429 430anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 340first strand
Strand 2
A
415 419anti-parallel
Strand 3
A
365 369anti-parallel
Strand 4
A
374 378anti-parallel
Strand 5
A
384 388anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 354first strand
Strand 2
A
402 406anti-parallel
Strand 3
A
396 399anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 448first strand
Strand 2
A
553 558anti-parallel
Strand 3
A
474 479anti-parallel
Strand 4
A
484 486anti-parallel
Strand 5
A
513 514anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
538 545anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 468first strand
Strand 2
A
538 545anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 505first strand
Strand 2
A
492 496anti-parallel
Strand 3
A
521 527anti-parallel
Strand 4
A
538 545anti-parallel
Strand 5
A
462 468anti-parallel
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There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 505first strand
Strand 2
A
492 496anti-parallel
Strand 3
A
521 527anti-parallel
Strand 4
A
538 545anti-parallel
Strand 5
A
457 458anti-parallel
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