Analysis of interatomic Contacts of Structural Units in PDB entry:
4UT9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4UT9 entry

There are 4 chains in PDB entry 4UT9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 1395
B	MET 1	PRO 1394
C	MET 1	PRO 1394
D	MET 1	LYS 160

There are 34 helices in PDB entry 4UT9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	82	86	Right-handed 310
Helix 2	2	A	100	104	Right-handed 310
Helix 3	3	A	131	134	Right-handed 310
Helix 4	4	A	210	215	Right-handed alpha
Helix 5	5	A	233	237	Right-handed 310
Helix 6	6	A	256	264	Right-handed alpha
Helix 7	7	A	288	291	Right-handed 310
Helix 8	8	B	82	86	Right-handed 310
Helix 9	9	B	100	104	Right-handed 310
Helix 10	10	B	131	135	Right-handed 310
Helix 11	11	B	210	215	Right-handed alpha
Helix 12	12	B	233	236	Right-handed 310
Helix 13	13	B	256	264	Right-handed alpha
Helix 14	14	C	82	87	Right-handed 310
Helix 15	15	C	100	104	Right-handed 310
Helix 16	16	C	131	133	Right-handed 310
Helix 17	17	C	210	215	Right-handed alpha
Helix 18	18	C	233	237	Right-handed 310
Helix 19	19	C	256	264	Right-handed alpha
Helix 20	20	D	100	104	Right-handed 310
Helix 21	21	D	131	133	Right-handed 310
Helix 22	22	D	210	215	Right-handed alpha
Helix 23	23	D	256	264	Right-handed alpha
Helix 24	24	H	28	30	Right-handed 310
Helix 25	25	H	73	76	Right-handed 310
Helix 26	26	H	83	87	Right-handed 310
Helix 27	27	I	28	30	Right-handed 310
Helix 28	28	I	73	76	Right-handed 310
Helix 29	29	I	83	87	Right-handed 310
Helix 30	30	J	28	30	Right-handed 310
Helix 31	31	J	73	76	Right-handed 310
Helix 32	32	J	83	87	Right-handed 310
Helix 33	33	K	28	30	Right-handed 310
Helix 34	34	K	83	87	Right-handed 310

There are 65 sheets in PDB entry 4UT9. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI, CA, CB, CC, CD, CE, CF, CG, CH, A, DB, C, DD, DE, DF, G, DH, DI, DJ, DK, HA, HB, HC, IA, IB, IC, JA, JB, JC, KA, KB, KC, LA, LB, LC, LD, MA, MB, MC, MD, NA, NB, NC, ND, OA, OB, OC, OD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	30	34	parallel
Strand 3	A	41	47	anti-parallel
Strand 4	A	137	143	anti-parallel
Strand 5	A	160	164	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	99	first strand
Strand 2	A	109	129	anti-parallel

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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	54	72	anti-parallel
Strand 3	A	109	129	parallel
Strand 4	A	196	201	anti-parallel
Strand 5	A	204	209	anti-parallel
Strand 6	A	268	269	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	54	72	anti-parallel
Strand 3	A	109	129	parallel
Strand 4	A	90	99	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	175	first strand
Strand 2	A	179	183	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	301	first strand
Strand 2	A	333	334	parallel
Strand 3	A	357	358	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	314	first strand
Strand 2	A	320	326	anti-parallel
Strand 3	A	365	366	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	340	first strand
Strand 2	A	374	380	anti-parallel
Strand 3	A	387	1393	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	351	first strand
Strand 2	A	369	370	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	30	34	parallel
Strand 3	B	41	47	anti-parallel
Strand 4	B	137	143	anti-parallel
Strand 5	B	160	164	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	26	first strand
Strand 2	B	282	292	anti-parallel
Strand 3	B	179	186	anti-parallel
Strand 4	B	170	175	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	99	first strand
Strand 2	B	109	129	anti-parallel

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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	222	first strand
Strand 2	B	54	72	anti-parallel
Strand 3	B	109	129	parallel
Strand 4	B	196	201	anti-parallel
Strand 5	B	204	209	anti-parallel
Strand 6	B	268	270	anti-parallel

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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	222	first strand
Strand 2	B	54	72	anti-parallel
Strand 3	B	109	129	parallel
Strand 4	B	90	99	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	241	first strand
Strand 2	B	249	252	anti-parallel

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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	301	first strand
Strand 2	B	333	334	parallel
Strand 3	B	357	358	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	306	314	first strand
Strand 2	B	320	326	anti-parallel
Strand 3	B	365	370	anti-parallel
Strand 4	B	350	351	anti-parallel

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There are 3 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	340	first strand
Strand 2	B	374	380	anti-parallel
Strand 3	B	389	1393	anti-parallel

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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	13	first strand
Strand 2	C	30	34	parallel
Strand 3	C	41	50	anti-parallel
Strand 4	C	135	143	anti-parallel
Strand 5	C	160	164	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	26	first strand
Strand 2	C	282	288	anti-parallel
Strand 3	C	179	187	anti-parallel
Strand 4	C	170	175	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	99	first strand
Strand 2	C	109	129	anti-parallel

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There are 6 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	222	first strand
Strand 2	C	54	72	anti-parallel
Strand 3	C	109	129	parallel
Strand 4	C	196	201	anti-parallel
Strand 5	C	204	209	anti-parallel
Strand 6	C	268	269	anti-parallel

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There are 4 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	222	first strand
Strand 2	C	54	72	anti-parallel
Strand 3	C	109	129	parallel
Strand 4	C	90	99	anti-parallel

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There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	314	first strand
Strand 2	C	320	326	anti-parallel
Strand 3	C	365	370	anti-parallel
Strand 4	C	350	351	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	334	first strand
Strand 2	C	357	358	anti-parallel

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There are 3 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	337	340	first strand
Strand 2	C	376	380	anti-parallel
Strand 3	C	387	391	anti-parallel

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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	13	first strand
Strand 2	D	30	34	parallel
Strand 3	D	41	50	anti-parallel
Strand 4	D	277	279	parallel

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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	13	first strand
Strand 2	D	30	34	parallel
Strand 3	D	41	50	anti-parallel
Strand 4	D	135	143	anti-parallel
Strand 5	D	160	164	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	277	279	first strand
Strand 2	D	41	50	parallel

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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	26	first strand
Strand 2	D	282	288	anti-parallel
Strand 3	D	179	184	anti-parallel
Strand 4	D	170	175	anti-parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	99	first strand
Strand 2	D	109	129	anti-parallel

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There are 6 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	222	first strand
Strand 2	D	54	72	anti-parallel
Strand 3	D	109	129	parallel
Strand 4	D	196	201	anti-parallel
Strand 5	D	204	209	anti-parallel
Strand 6	D	268	269	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	222	first strand
Strand 2	D	54	72	anti-parallel
Strand 3	D	109	129	parallel
Strand 4	D	90	99	anti-parallel

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There are 2 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	241	first strand
Strand 2	D	249	252	anti-parallel

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There are 3 strands in DI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	301	first strand
Strand 2	D	333	334	parallel
Strand 3	D	357	358	anti-parallel

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There are 4 strands in DJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	306	314	first strand
Strand 2	D	320	326	anti-parallel
Strand 3	D	365	370	anti-parallel
Strand 4	D	350	351	anti-parallel

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There are 3 strands in DK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	337	340	first strand
Strand 2	D	374	380	anti-parallel
Strand 3	D	387	1393	anti-parallel

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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	22	25	anti-parallel

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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	108	111	parallel
Strand 3	H	88	96	anti-parallel
Strand 4	H	32	39	anti-parallel
Strand 5	H	45	52	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	20	first strand
Strand 2	H	77	82	anti-parallel
Strand 3	H	67	72	anti-parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	6	first strand
Strand 2	I	22	25	anti-parallel

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There are 6 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	108	111	parallel
Strand 3	I	88	96	anti-parallel
Strand 4	I	32	39	anti-parallel
Strand 5	I	45	52	anti-parallel
Strand 6	I	57	59	anti-parallel

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There are 3 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	18	20	first strand
Strand 2	I	77	82	anti-parallel
Strand 3	I	67	72	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	6	first strand
Strand 2	J	22	25	anti-parallel

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There are 6 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	108	111	parallel
Strand 3	J	88	96	anti-parallel
Strand 4	J	32	39	anti-parallel
Strand 5	J	45	52	anti-parallel
Strand 6	J	57	59	anti-parallel

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There are 3 strands in JC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	18	20	first strand
Strand 2	J	77	82	anti-parallel
Strand 3	J	67	72	anti-parallel

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There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	6	first strand
Strand 2	K	22	25	anti-parallel

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There are 6 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	108	111	parallel
Strand 3	K	88	96	anti-parallel
Strand 4	K	32	39	anti-parallel
Strand 5	K	45	52	anti-parallel
Strand 6	K	57	59	anti-parallel

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There are 3 strands in KC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	18	20	first strand
Strand 2	K	77	82	anti-parallel
Strand 3	K	67	72	anti-parallel

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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	96	98	parallel

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There are 5 strands in LB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	48	anti-parallel

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There are 2 strands in LC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	96	98	first strand
Strand 2	L	85	91	parallel

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There are 3 strands in LD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	67	anti-parallel

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There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	9	12	first strand
Strand 2	M	102	105	parallel
Strand 3	M	85	91	anti-parallel
Strand 4	M	96	98	parallel

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There are 5 strands in MB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	9	12	first strand
Strand 2	M	102	105	parallel
Strand 3	M	85	91	anti-parallel
Strand 4	M	33	38	anti-parallel
Strand 5	M	45	48	anti-parallel

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There are 2 strands in MC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	96	98	first strand
Strand 2	M	85	91	parallel

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There are 3 strands in MD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	19	21	first strand
Strand 2	M	70	75	anti-parallel
Strand 3	M	62	67	anti-parallel

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There are 4 strands in NA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	12	first strand
Strand 2	N	102	105	parallel
Strand 3	N	85	91	anti-parallel
Strand 4	N	96	98	parallel

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There are 5 strands in NB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	12	first strand
Strand 2	N	102	105	parallel
Strand 3	N	85	91	anti-parallel
Strand 4	N	33	38	anti-parallel
Strand 5	N	45	48	anti-parallel

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There are 2 strands in NC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	96	98	first strand
Strand 2	N	85	91	parallel

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There are 3 strands in ND sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	19	24	first strand
Strand 2	N	70	75	anti-parallel
Strand 3	N	62	67	anti-parallel

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There are 4 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	9	12	first strand
Strand 2	O	102	105	parallel
Strand 3	O	85	91	anti-parallel
Strand 4	O	96	98	parallel

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There are 5 strands in OB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	9	12	first strand
Strand 2	O	102	105	parallel
Strand 3	O	85	91	anti-parallel
Strand 4	O	33	38	anti-parallel
Strand 5	O	45	48	anti-parallel

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There are 2 strands in OC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	96	98	first strand
Strand 2	O	85	91	parallel

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There are 3 strands in OD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	19	24	first strand
Strand 2	O	70	75	anti-parallel
Strand 3	O	62	67	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4UT9

Analysis of interatomic Contacts of Structural Units in PDB entry:
4UT9