Analysis of interatomic Contacts of Structural Units in PDB entry:
4UUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UUO entry

There is 1 chain in PDB entry 4UUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2HIS 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 4UUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
41 43Right-handed 310
Helix 3
3
A
44 59Right-handed alpha
Helix 4
4
A
71 77Right-handed alpha
Helix 5
5
A
95 118Right-handed alpha
Helix 6
6
A
130 140Right-handed alpha
Helix 7
7
A
154 170Right-handed alpha
Helix 8
8
A
172 174Right-handed 310
Helix 9
9
A
208 210Right-handed 310
Helix 10
10
A
212 217Right-handed alpha
Helix 11
11
A
218 236Right-handed alpha
Helix 12
12
A
239 257Right-handed alpha
Helix 13
13
A
274 278Right-handed 310
Helix 14
14
A
305 330Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4UUO. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
34 39parallel
Strand 3
A
4 8parallel
Strand 4
A
81 84parallel
Strand 5
A
123 126parallel
Strand 6
A
150 152parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
197 198anti-parallel
Strand 3
A
205 206anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
A
190 192anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
283 290anti-parallel
Strand 3
A
296 298anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il