Analysis of interatomic Contacts of Structural Units in PDB entry:
4UUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UUY entry

There are 2 chains in PDB entry 4UUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ARG 349
B
 SER 2VAL 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4UUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
97 100Right-handed 310
Helix 2
2
A
248 250Right-handed 310
Helix 3
3
A
338 348Right-handed alpha
Helix 4
4
B
12 16Right-handed 310
Helix 5
5
B
97 100Right-handed 310
Helix 6
6
B
248 250Right-handed 310
Helix 7
7
B
338 348Right-handed alpha
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There are 14 sheets in PDB entry 4UUY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
331 337anti-parallel
Strand 3
A
322 327anti-parallel
Strand 4
A
311 317anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
A
30 34anti-parallel
Strand 3
A
38 43anti-parallel
Strand 4
A
50 54anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
85 89anti-parallel
Strand 4
A
92 95anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 109first strand
Strand 2
A
114 119anti-parallel
Strand 3
A
124 130anti-parallel
Strand 4
A
135 142anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 156first strand
Strand 2
A
159 164anti-parallel
Strand 3
A
167 171anti-parallel
Strand 4
A
186 189anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
207 211anti-parallel
Strand 3
A
215 220anti-parallel
Strand 4
A
243 246anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 266first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
278 283anti-parallel
Strand 4
A
289 294anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 10first strand
Strand 2
B
331 337anti-parallel
Strand 3
B
322 327anti-parallel
Strand 4
B
311 317anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 27first strand
Strand 2
B
30 34anti-parallel
Strand 3
B
38 43anti-parallel
Strand 4
B
50 54anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
76 80anti-parallel
Strand 3
B
85 89anti-parallel
Strand 4
B
92 95anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 109first strand
Strand 2
B
114 119anti-parallel
Strand 3
B
124 130anti-parallel
Strand 4
B
135 142anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 156first strand
Strand 2
B
159 164anti-parallel
Strand 3
B
167 171anti-parallel
Strand 4
B
186 189anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 204first strand
Strand 2
B
207 211anti-parallel
Strand 3
B
215 220anti-parallel
Strand 4
B
243 246anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 266first strand
Strand 2
B
270 275anti-parallel
Strand 3
B
278 283anti-parallel
Strand 4
B
289 294anti-parallel
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