Analysis of interatomic Contacts of Structural Units in PDB entry:
4UW7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4UW7 entry

There are 3 chains in PDB entry 4UW7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 990	THR 1263
B	CYS 989	THR 1263
C	GLU 988	THR 1263

There are 15 helices in PDB entry 4UW7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	1009	1013	Right-handed 310
Helix 2	2	A	1069	1073	Right-handed 310
Helix 3	3	A	1094	1098	Right-handed 310
Helix 4	4	A	1102	1110	Right-handed alpha
Helix 5	5	A	1116	1120	Right-handed 310
Helix 6	6	B	1009	1013	Right-handed 310
Helix 7	7	B	1069	1073	Right-handed 310
Helix 8	8	B	1094	1098	Right-handed 310
Helix 9	9	B	1102	1110	Right-handed alpha
Helix 10	10	B	1116	1120	Right-handed 310
Helix 11	11	C	1009	1013	Right-handed 310
Helix 12	12	C	1069	1073	Right-handed 310
Helix 13	13	C	1094	1098	Right-handed 310
Helix 14	14	C	1102	1110	Right-handed alpha
Helix 15	15	C	1116	1120	Right-handed 310

There are 9 sheets in PDB entry 4UW7. Click on sheet of interest to get list of strands forming it: AA, AB, CA, AC, BA, BB, AD, AE, BC,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	991	993	first strand
Strand 2	C	1002	1007	parallel
Strand 3	B	1020	1028	parallel
Strand 4	B	1040	1046	anti-parallel
Strand 5	B	1057	1063	anti-parallel
Strand 6	B	1074	1079	anti-parallel
Strand 7	B	1085	1087	anti-parallel
Strand 8	B	1123	1127	parallel
Strand 9	A	1133	1139	parallel
Strand 10	C	1148	1156	parallel
Strand 11	C	1165	1166	anti-parallel

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There are 15 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	991	993	first strand
Strand 2	C	1002	1007	parallel
Strand 3	B	1020	1028	parallel
Strand 4	B	1040	1046	anti-parallel
Strand 5	B	1057	1063	anti-parallel
Strand 6	B	1074	1079	anti-parallel
Strand 7	B	1085	1087	anti-parallel
Strand 8	B	1123	1127	parallel
Strand 9	A	1133	1139	parallel
Strand 10	C	1148	1156	parallel
Strand 11	B	1173	1180	parallel
Strand 12	B	1191	1197	anti-parallel
Strand 13	B	1208	1215	anti-parallel
Strand 14	B	1222	1228	anti-parallel
Strand 15	B	1234	1236	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1165	1166	first strand
Strand 2	C	1148	1156	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1165	1166	first strand
Strand 2	A	1148	1156	anti-parallel

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There are 11 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	993	first strand
Strand 2	A	1002	1007	parallel
Strand 3	C	1020	1028	parallel
Strand 4	C	1040	1046	anti-parallel
Strand 5	C	1057	1063	anti-parallel
Strand 6	C	1074	1079	anti-parallel
Strand 7	C	1085	1087	anti-parallel
Strand 8	C	1123	1127	parallel
Strand 9	B	1133	1139	parallel
Strand 10	A	1148	1156	parallel
Strand 11	A	1165	1166	anti-parallel

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There are 15 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	993	first strand
Strand 2	A	1002	1007	parallel
Strand 3	C	1020	1028	parallel
Strand 4	C	1040	1046	anti-parallel
Strand 5	C	1057	1063	anti-parallel
Strand 6	C	1074	1079	anti-parallel
Strand 7	C	1085	1087	anti-parallel
Strand 8	C	1123	1127	parallel
Strand 9	B	1133	1139	parallel
Strand 10	A	1148	1156	parallel
Strand 11	C	1173	1180	parallel
Strand 12	C	1191	1197	anti-parallel
Strand 13	C	1208	1215	anti-parallel
Strand 14	C	1222	1228	anti-parallel
Strand 15	C	1234	1236	anti-parallel

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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1234	1236	first strand
Strand 2	A	1222	1228	anti-parallel
Strand 3	A	1208	1215	anti-parallel
Strand 4	A	1191	1197	anti-parallel
Strand 5	A	1173	1180	anti-parallel
Strand 6	B	1148	1156	parallel
Strand 7	B	1165	1166	anti-parallel

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There are 15 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1234	1236	first strand
Strand 2	A	1222	1228	anti-parallel
Strand 3	A	1208	1215	anti-parallel
Strand 4	A	1191	1197	anti-parallel
Strand 5	A	1173	1180	anti-parallel
Strand 6	B	1148	1156	parallel
Strand 7	C	1133	1139	parallel
Strand 8	A	1123	1127	parallel
Strand 9	A	1085	1087	parallel
Strand 10	A	1074	1079	anti-parallel
Strand 11	A	1057	1063	anti-parallel
Strand 12	A	1040	1046	anti-parallel
Strand 13	A	1020	1028	anti-parallel
Strand 14	B	1001	1007	parallel
Strand 15	C	989	993	parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1165	1166	first strand
Strand 2	B	1148	1156	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4UW7

Analysis of interatomic Contacts of Structural Units in PDB entry:
4UW7