Analysis of interatomic Contacts of Structural Units in PDB entry:
4UW9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UW9 entry

There is 1 chain in PDB entry 4UW9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLY 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4UW9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 28Right-handed alpha
Helix 2
2
A
33 41Right-handed alpha
Helix 3
3
A
45 57Right-handed alpha
Helix 4
4
A
58 64Right-handed alpha
Helix 5
5
A
67 92Right-handed alpha
Helix 6
6
A
98 111Right-handed alpha
Helix 7
7
A
123 131Right-handed alpha
Helix 8
8
A
138 142Right-handed alpha
Helix 9
9
A
152 168Right-handed alpha
Helix 10
10
A
180 190Right-handed alpha
Helix 11
11
A
217 225Right-handed alpha
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There are 3 sheets in PDB entry 4UW9. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
114 117parallel
Strand 3
A
2 6parallel
Strand 4
A
173 178parallel
Strand 5
A
193 197parallel
Strand 6
A
208 210parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
A
96 97anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
136 137anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il