Analysis of interatomic Contacts of Structural Units in PDB entry:
4UWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UWM entry

There are 2 chains in PDB entry 4UWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 376
B
 MET 1LYS 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4UWM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 36Right-handed alpha
Helix 2
2
A
56 66Right-handed alpha
Helix 3
3
A
81 83Right-handed 310
Helix 4
4
A
84 99Right-handed alpha
Helix 5
5
A
112 119Right-handed alpha
Helix 6
6
A
138 156Right-handed alpha
Helix 7
7
A
180 184Right-handed 310
Helix 8
8
A
190 194Right-handed 310
Helix 9
9
A
207 217Right-handed alpha
Helix 10
10
A
226 245Right-handed alpha
Helix 11
11
A
249 252Right-handed 310
Helix 12
12
A
264 275Right-handed alpha
Helix 13
13
A
275 284Right-handed alpha
Helix 14
14
A
284 292Right-handed alpha
Helix 15
15
A
295 303Right-handed alpha
Helix 16
16
A
305 309Right-handed 310
Helix 17
17
A
310 318Right-handed alpha
Helix 18
18
A
323 339Right-handed alpha
Helix 19
19
A
355 368Right-handed alpha
Helix 20
20
A
369 373Right-handed 310
Helix 21
21
B
18 36Right-handed alpha
Helix 22
22
B
56 66Right-handed alpha
Helix 23
23
B
81 83Right-handed 310
Helix 24
24
B
84 99Right-handed alpha
Helix 25
25
B
112 119Right-handed alpha
Helix 26
26
B
138 156Right-handed alpha
Helix 27
27
B
180 184Right-handed 310
Helix 28
28
B
190 194Right-handed 310
Helix 29
29
B
207 217Right-handed alpha
Helix 30
30
B
226 245Right-handed alpha
Helix 31
31
B
249 252Right-handed 310
Helix 32
32
B
264 275Right-handed alpha
Helix 33
33
B
275 284Right-handed alpha
Helix 34
34
B
284 292Right-handed alpha
Helix 35
35
B
295 303Right-handed alpha
Helix 36
36
B
305 309Right-handed 310
Helix 37
37
B
310 318Right-handed alpha
Helix 38
38
B
323 339Right-handed alpha
Helix 39
39
B
354 369Right-handed alpha
Helix 40
40
B
370 373Right-handed 310
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There are 6 sheets in PDB entry 4UWM. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
40 43parallel
Strand 3
A
4 9parallel
Strand 4
A
343 347parallel
Strand 5
A
254 257parallel
Strand 6
A
219 223parallel
Strand 7
A
198 202parallel
Strand 8
A
105 108parallel
Strand 9
A
78 79parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
167 170anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
320 322parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 75first strand
Strand 2
B
40 43parallel
Strand 3
B
4 9parallel
Strand 4
B
343 347parallel
Strand 5
B
254 257parallel
Strand 6
B
219 223parallel
Strand 7
B
198 202parallel
Strand 8
B
105 108parallel
Strand 9
B
78 79parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 162first strand
Strand 2
B
167 170anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 261first strand
Strand 2
B
320 322parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il