Analysis of interatomic Contacts of Structural Units in PDB entry:
4UYA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UYA entry

There is 1 chain in PDB entry 4UYA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 115LYS 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4UYA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
120 124Right-handed 310
Helix 2
2
A
164 176Right-handed alpha
Helix 3
3
A
207 213Right-handed alpha
Helix 4
4
A
233 253Right-handed alpha
Helix 5
5
A
265 267Right-handed 310
Helix 6
6
A
312 317Right-handed alpha
Helix 7
7
A
322 340Right-handed alpha
Helix 8
8
A
348 358Right-handed alpha
Helix 9
9
A
372 381Right-handed alpha
Helix 10
10
A
390 400Right-handed alpha
Helix 11
11
A
410 437Right-handed alpha
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There are 2 sheets in PDB entry 4UYA. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
186 190parallel
Strand 3
A
197 201anti-parallel
Strand 4
A
146 152anti-parallel
Strand 5
A
138 143anti-parallel
Strand 6
A
125 129anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 271first strand
Strand 2
A
285 287anti-parallel
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