Analysis of interatomic Contacts of Structural Units in PDB entry:
4UZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UZJ entry

There are 2 chains in PDB entry 4UZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 84THR 617
B
 HIS 85PRO 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4UZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 142Right-handed alpha
Helix 2
2
A
143 146Right-handed 310
Helix 3
3
A
158 162Right-handed 310
Helix 4
4
A
206 219Right-handed alpha
Helix 5
5
A
237 256Right-handed alpha
Helix 6
6
A
285 298Right-handed alpha
Helix 7
7
A
302 309Right-handed alpha
Helix 8
8
A
312 317Right-handed 310
Helix 9
9
A
318 323Right-handed alpha
Helix 10
10
A
324 326Right-handed 310
Helix 11
11
A
339 346Right-handed alpha
Helix 12
12
A
352 370Right-handed alpha
Helix 13
13
A
389 394Right-handed 310
Helix 14
14
A
402 413Right-handed alpha
Helix 15
15
B
131 142Right-handed alpha
Helix 16
16
B
143 146Right-handed 310
Helix 17
17
B
158 162Right-handed 310
Helix 18
18
B
206 222Right-handed alpha
Helix 19
19
B
237 256Right-handed alpha
Helix 20
20
B
285 298Right-handed alpha
Helix 21
21
B
302 307Right-handed alpha
Helix 22
22
B
312 317Right-handed 310
Helix 23
23
B
318 323Right-handed alpha
Helix 24
24
B
324 326Right-handed 310
Helix 25
25
B
339 346Right-handed alpha
Helix 26
26
B
352 370Right-handed alpha
Helix 27
27
B
389 394Right-handed 310
Helix 28
28
B
402 412Right-handed alpha
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There are 6 sheets in PDB entry 4UZJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
88 92anti-parallel
Strand 3
A
107 111anti-parallel
Strand 4
A
175 179anti-parallel
Strand 5
A
118 123parallel
Strand 6
A
229 236parallel
Strand 7
A
262 269parallel
Strand 8
A
330 333parallel
Strand 9
A
376 378parallel
Strand 10
A
601 603parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
382 383parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 397first strand
Strand 2
A
400 401anti-parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
88 92anti-parallel
Strand 3
B
107 111anti-parallel
Strand 4
B
175 179anti-parallel
Strand 5
B
118 123parallel
Strand 6
B
229 236parallel
Strand 7
B
262 269parallel
Strand 8
B
330 333parallel
Strand 9
B
376 378parallel
Strand 10
B
601 603parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 338first strand
Strand 2
B
382 383parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
396 397first strand
Strand 2
B
400 401anti-parallel
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