Analysis of interatomic Contacts of Structural Units in PDB entry:
4UZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UZK entry

There are 2 chains in PDB entry 4UZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 86THR 617
B
 ARG 86PRO 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4UZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 142Right-handed alpha
Helix 2
2
A
143 146Right-handed 310
Helix 3
3
A
158 162Right-handed 310
Helix 4
4
A
206 219Right-handed alpha
Helix 5
5
A
220 222Right-handed 310
Helix 6
6
A
237 256Right-handed alpha
Helix 7
7
A
285 298Right-handed alpha
Helix 8
8
A
302 309Right-handed alpha
Helix 9
9
A
312 317Right-handed 310
Helix 10
10
A
318 323Right-handed alpha
Helix 11
11
A
324 326Right-handed 310
Helix 12
12
A
339 345Right-handed alpha
Helix 13
13
A
352 370Right-handed alpha
Helix 14
14
A
389 394Right-handed 310
Helix 15
15
A
402 413Right-handed alpha
Helix 16
16
B
131 142Right-handed alpha
Helix 17
17
B
143 146Right-handed 310
Helix 18
18
B
158 162Right-handed 310
Helix 19
19
B
206 219Right-handed alpha
Helix 20
20
B
237 256Right-handed alpha
Helix 21
21
B
285 298Right-handed alpha
Helix 22
22
B
302 307Right-handed alpha
Helix 23
23
B
312 317Right-handed 310
Helix 24
24
B
318 323Right-handed alpha
Helix 25
25
B
324 326Right-handed 310
Helix 26
26
B
339 345Right-handed alpha
Helix 27
27
B
352 370Right-handed alpha
Helix 28
28
B
389 394Right-handed 310
Helix 29
29
B
402 413Right-handed alpha
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There are 6 sheets in PDB entry 4UZK. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
88 92anti-parallel
Strand 3
A
107 111anti-parallel
Strand 4
A
175 179anti-parallel
Strand 5
A
118 123parallel
Strand 6
A
229 236parallel
Strand 7
A
262 269parallel
Strand 8
A
330 333parallel
Strand 9
A
376 378parallel
Strand 10
A
601 603parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
382 383parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 397first strand
Strand 2
A
400 401anti-parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
88 92anti-parallel
Strand 3
B
107 111anti-parallel
Strand 4
B
175 179anti-parallel
Strand 5
B
118 123parallel
Strand 6
B
229 236parallel
Strand 7
B
262 269parallel
Strand 8
B
330 333parallel
Strand 9
B
376 378parallel
Strand 10
B
601 603parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 338first strand
Strand 2
B
382 383parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
396 397first strand
Strand 2
B
400 401anti-parallel
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