Analysis of interatomic Contacts of Structural Units in PDB entry:
4UZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UZL entry

There are 2 chains in PDB entry 4UZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 86THR 451
B
 ASN 86THR 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 4UZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
132 143Right-handed alpha
Helix 2
2
A
144 148Right-handed 310
Helix 3
3
A
159 163Right-handed 310
Helix 4
4
A
203 217Right-handed alpha
Helix 5
5
A
232 252Right-handed alpha
Helix 6
6
A
286 298Right-handed alpha
Helix 7
7
A
303 308Right-handed alpha
Helix 8
8
A
314 319Right-handed 310
Helix 9
9
A
320 325Right-handed alpha
Helix 10
10
A
326 328Right-handed 310
Helix 11
11
A
341 347Right-handed alpha
Helix 12
12
A
361 375Right-handed alpha
Helix 13
13
A
394 399Right-handed 310
Helix 14
14
A
407 417Right-handed alpha
Helix 15
15
B
132 143Right-handed alpha
Helix 16
16
B
144 148Right-handed 310
Helix 17
17
B
159 163Right-handed 310
Helix 18
18
B
203 217Right-handed alpha
Helix 19
19
B
218 223Right-handed 310
Helix 20
20
B
232 253Right-handed alpha
Helix 21
21
B
286 299Right-handed alpha
Helix 22
22
B
303 308Right-handed alpha
Helix 23
23
B
314 319Right-handed 310
Helix 24
24
B
320 325Right-handed alpha
Helix 25
25
B
326 328Right-handed 310
Helix 26
26
B
341 347Right-handed alpha
Helix 27
27
B
357 375Right-handed alpha
Helix 28
28
B
394 399Right-handed 310
Helix 29
29
B
407 418Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4UZL. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
108 112anti-parallel
Strand 4
A
176 180anti-parallel
Strand 5
A
119 124parallel
Strand 6
A
225 231parallel
Strand 7
A
258 264parallel
Strand 8
A
332 335parallel
Strand 9
A
381 383parallel
Strand 10
A
435 437parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 340first strand
Strand 2
A
387 388parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
405 406anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
89 93anti-parallel
Strand 3
B
108 112anti-parallel
Strand 4
B
176 180anti-parallel
Strand 5
B
119 124parallel
Strand 6
B
225 231parallel
Strand 7
B
258 264parallel
Strand 8
B
332 335parallel
Strand 9
B
381 383parallel
Strand 10
B
435 437parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 340first strand
Strand 2
B
387 388parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 402first strand
Strand 2
B
405 406anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il