Analysis of interatomic Contacts of Structural Units in PDB entry:
4UZN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UZN entry

There are 2 chains in PDB entry 4UZN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 461ALA 565
B
 THR 461ALA 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 4UZN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
525 531Right-handed alpha
Helix 2
2
B
525 531Right-handed alpha
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There are 4 sheets in PDB entry 4UZN. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 464first strand
Strand 2
A
474 479anti-parallel
Strand 3
A
521 524anti-parallel
Strand 4
A
513 516anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 470first strand
Strand 2
A
559 564anti-parallel
Strand 3
A
548 556anti-parallel
Strand 4
A
535 543anti-parallel
Strand 5
A
485 492anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 464first strand
Strand 2
B
474 479anti-parallel
Strand 3
B
521 524anti-parallel
Strand 4
B
513 516anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 470first strand
Strand 2
B
559 564anti-parallel
Strand 3
B
548 556anti-parallel
Strand 4
B
535 543anti-parallel
Strand 5
B
485 492anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il