Analysis of interatomic Contacts of Structural Units in PDB entry:
4UZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UZU entry

There is 1 chain in PDB entry 4UZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4LYS 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4UZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 36Right-handed alpha
Helix 2
2
A
80 94Right-handed alpha
Helix 3
3
A
157 159Right-handed 310
Helix 4
4
A
206 225Right-handed alpha
Helix 5
5
A
233 237Right-handed 310
Helix 6
6
A
240 254Right-handed alpha
Helix 7
7
A
267 278Right-handed alpha
Helix 8
8
A
286 298Right-handed alpha
Helix 9
9
A
304 308Right-handed 310
Helix 10
10
A
312 317Right-handed alpha
Helix 11
11
A
344 355Right-handed alpha
Helix 12
12
A
364 369Right-handed alpha
Helix 13
13
A
371 374Right-handed 310
Helix 14
14
A
378 392Right-handed alpha
Helix 15
15
A
439 443Right-handed 310
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There are 7 sheets in PDB entry 4UZU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
40 43parallel
Strand 3
A
97 102parallel
Strand 4
A
228 231parallel
Strand 5
A
258 261parallel
Strand 6
A
283 285parallel
Strand 7
A
321 324parallel
Strand 8
A
359 363parallel
Strand 9
A
8 10parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
59 61anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
200 202anti-parallel
Strand 3
A
161 167anti-parallel
Strand 4
A
172 178anti-parallel
Strand 5
A
112 122anti-parallel
Strand 6
A
125 129anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
200 202anti-parallel
Strand 3
A
161 167anti-parallel
Strand 4
A
172 178anti-parallel
Strand 5
A
112 122anti-parallel
Strand 6
A
134 141anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
112 122anti-parallel
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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 400first strand
Strand 2
A
406 411anti-parallel
Strand 3
A
422 427anti-parallel
Strand 4
A
475 480anti-parallel
Strand 5
A
446 449anti-parallel
Strand 6
A
457 459anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 437first strand
Strand 2
A
465 470anti-parallel
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