Analysis of interatomic Contacts of Structural Units in PDB entry:
4V00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V00 entry

There are 2 chains in PDB entry 4V00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 18ASP 360
B
 HIS 18LYS 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4V00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 37Right-handed 310
Helix 2
2
A
40 44Right-handed 310
Helix 3
3
A
57 77Right-handed alpha
Helix 4
4
A
78 84Right-handed 310
Helix 5
5
A
88 101Right-handed alpha
Helix 6
6
A
127 148Right-handed alpha
Helix 7
7
A
172 180Right-handed alpha
Helix 8
8
A
180 201Right-handed alpha
Helix 9
9
A
205 229Right-handed alpha
Helix 10
10
A
230 235Right-handed 310
Helix 11
11
A
236 256Right-handed alpha
Helix 12
12
A
261 271Right-handed alpha
Helix 13
13
A
290 310Right-handed alpha
Helix 14
14
A
312 322Right-handed alpha
Helix 15
15
A
324 340Right-handed alpha
Helix 16
16
A
345 353Right-handed alpha
Helix 17
17
B
33 37Right-handed 310
Helix 18
18
B
40 44Right-handed 310
Helix 19
19
B
57 77Right-handed alpha
Helix 20
20
B
78 84Right-handed 310
Helix 21
21
B
88 101Right-handed alpha
Helix 22
22
B
127 148Right-handed alpha
Helix 23
23
B
172 180Right-handed alpha
Helix 24
24
B
180 201Right-handed alpha
Helix 25
25
B
205 229Right-handed alpha
Helix 26
26
B
230 235Right-handed 310
Helix 27
27
B
236 256Right-handed alpha
Helix 28
28
B
261 270Right-handed alpha
Helix 29
29
B
290 310Right-handed alpha
Helix 30
30
B
312 322Right-handed alpha
Helix 31
31
B
324 340Right-handed alpha
Helix 32
32
B
345 353Right-handed alpha
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There are 2 sheets in PDB entry 4V00. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
156 159parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 53first strand
Strand 2
B
156 159parallel
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