Analysis of interatomic Contacts of Structural Units in PDB entry:
4V03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V03 entry

There are 2 chains in PDB entry 4V03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ARG 248
B
 ALA 2LYS 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4V03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 30Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
52 56Right-handed 310
Helix 4
4
A
59 66Right-handed alpha
Helix 5
5
A
69 74Right-handed alpha
Helix 6
6
A
98 112Right-handed alpha
Helix 7
7
A
129 135Right-handed alpha
Helix 8
8
A
147 163Right-handed alpha
Helix 9
9
A
177 183Right-handed alpha
Helix 10
10
A
188 197Right-handed alpha
Helix 11
11
A
209 216Right-handed alpha
Helix 12
12
A
219 223Right-handed 310
Helix 13
13
A
226 240Right-handed alpha
Helix 14
14
B
15 30Right-handed alpha
Helix 15
15
B
45 50Right-handed alpha
Helix 16
16
B
52 56Right-handed 310
Helix 17
17
B
59 66Right-handed alpha
Helix 18
18
B
69 73Right-handed 310
Helix 19
19
B
98 113Right-handed alpha
Helix 20
20
B
129 135Right-handed alpha
Helix 21
21
B
147 164Right-handed alpha
Helix 22
22
B
177 183Right-handed alpha
Helix 23
23
B
188 197Right-handed alpha
Helix 24
24
B
209 216Right-handed alpha
Helix 25
25
B
219 223Right-handed 310
Helix 26
26
B
226 240Right-handed alpha
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There are 2 sheets in PDB entry 4V03. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 86anti-parallel
Strand 3
A
34 38parallel
Strand 4
A
117 121parallel
Strand 5
A
3 9parallel
Strand 6
A
139 144parallel
Strand 7
A
169 176parallel
Strand 8
A
200 205parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 86anti-parallel
Strand 3
B
34 38parallel
Strand 4
B
117 121parallel
Strand 5
B
3 9parallel
Strand 6
B
139 144parallel
Strand 7
B
169 176parallel
Strand 8
B
200 205parallel
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