Analysis of interatomic Contacts of Structural Units in PDB entry:
4V0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V0H entry

There are 4 chains in PDB entry 4V0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6LEU 241
B
 ARG 5LEU 241
C
 ARG 5LEU 241
D
 ARG 5ARG 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4V0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
70 79Right-handed alpha
Helix 2
2
A
89 91Right-handed 310
Helix 3
3
A
92 103Right-handed alpha
Helix 4
4
A
106 110Right-handed 310
Helix 5
5
A
125 129Right-handed 310
Helix 6
6
A
195 197Right-handed 310
Helix 7
7
A
206 210Right-handed 310
Helix 8
8
A
212 227Right-handed alpha
Helix 9
9
B
70 79Right-handed alpha
Helix 10
10
B
89 91Right-handed 310
Helix 11
11
B
92 103Right-handed alpha
Helix 12
12
B
106 110Right-handed 310
Helix 13
13
B
119 124Right-handed alpha
Helix 14
14
B
125 129Right-handed 310
Helix 15
15
B
195 197Right-handed 310
Helix 16
16
B
206 210Right-handed 310
Helix 17
17
B
212 227Right-handed alpha
Helix 18
18
C
70 79Right-handed alpha
Helix 19
19
C
89 91Right-handed 310
Helix 20
20
C
92 103Right-handed alpha
Helix 21
21
C
106 110Right-handed 310
Helix 22
22
C
125 129Right-handed 310
Helix 23
23
C
195 197Right-handed 310
Helix 24
24
C
206 210Right-handed 310
Helix 25
25
C
212 227Right-handed alpha
Helix 26
26
D
70 79Right-handed alpha
Helix 27
27
D
89 91Right-handed 310
Helix 28
28
D
92 103Right-handed alpha
Helix 29
29
D
106 110Right-handed 310
Helix 30
30
D
125 129Right-handed 310
Helix 31
31
D
195 197Right-handed 310
Helix 32
32
D
206 210Right-handed 310
Helix 33
33
D
212 227Right-handed alpha
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There are 12 sheets in PDB entry 4V0H. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
238 239anti-parallel
Strand 3
A
229 232anti-parallel
Strand 4
A
188 194parallel
Strand 5
A
178 185anti-parallel
Strand 6
A
164 168anti-parallel
Strand 7
A
158 161anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
22 28anti-parallel
Strand 3
A
47 52anti-parallel
Strand 4
A
83 85anti-parallel
Strand 5
A
112 115parallel
Strand 6
A
133 136parallel
Strand 7
A
139 142anti-parallel
Strand 8
A
146 147anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
41 44anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
238 240anti-parallel
Strand 3
B
229 232anti-parallel
Strand 4
B
188 194parallel
Strand 5
B
178 185anti-parallel
Strand 6
B
164 168anti-parallel
Strand 7
B
158 161anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
22 28anti-parallel
Strand 3
B
47 52anti-parallel
Strand 4
B
83 85anti-parallel
Strand 5
B
112 115parallel
Strand 6
B
133 136parallel
Strand 7
B
139 142anti-parallel
Strand 8
B
146 147anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 34first strand
Strand 2
B
41 44anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 8first strand
Strand 2
C
238 240anti-parallel
Strand 3
C
229 232anti-parallel
Strand 4
C
188 194parallel
Strand 5
C
178 185anti-parallel
Strand 6
C
164 168anti-parallel
Strand 7
C
158 161anti-parallel
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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 17first strand
Strand 2
C
22 28anti-parallel
Strand 3
C
47 52anti-parallel
Strand 4
C
83 85anti-parallel
Strand 5
C
112 115parallel
Strand 6
C
133 136parallel
Strand 7
C
139 142anti-parallel
Strand 8
C
146 147anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 34first strand
Strand 2
C
41 44anti-parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 8first strand
Strand 2
D
238 240anti-parallel
Strand 3
D
229 232anti-parallel
Strand 4
D
188 194parallel
Strand 5
D
178 185anti-parallel
Strand 6
D
164 168anti-parallel
Strand 7
D
158 161anti-parallel
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There are 8 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 17first strand
Strand 2
D
22 28anti-parallel
Strand 3
D
47 52anti-parallel
Strand 4
D
83 85anti-parallel
Strand 5
D
112 115parallel
Strand 6
D
133 136parallel
Strand 7
D
139 142anti-parallel
Strand 8
D
146 147anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 34first strand
Strand 2
D
41 44anti-parallel
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