Analysis of interatomic Contacts of Structural Units in PDB entry:
4V0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V0Q entry

There is 1 chain in PDB entry 4V0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6MET 883
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 4V0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 18Right-handed alpha
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
38 47Right-handed alpha
Helix 4
4
A
57 68Right-handed alpha
Helix 5
5
A
85 92Right-handed alpha
Helix 6
6
A
120 122Right-handed 310
Helix 7
7
A
131 135Right-handed 310
Helix 8
8
A
153 169Right-handed alpha
Helix 9
9
A
170 172Right-handed 310
Helix 10
10
A
186 201Right-handed alpha
Helix 11
11
A
226 244Right-handed alpha
Helix 12
12
A
263 267Right-handed 310
Helix 13
13
A
272 287Right-handed alpha
Helix 14
14
A
321 326Right-handed alpha
Helix 15
15
A
328 332Right-handed 310
Helix 16
16
A
334 339Right-handed alpha
Helix 17
17
A
346 358Right-handed alpha
Helix 18
18
A
366 385Right-handed alpha
Helix 19
19
A
394 404Right-handed alpha
Helix 20
20
A
418 425Right-handed alpha
Helix 21
21
A
427 443Right-handed alpha
Helix 22
22
A
470 489Right-handed alpha
Helix 23
23
A
489 494Right-handed alpha
Helix 24
24
A
498 503Right-handed alpha
Helix 25
25
A
510 523Right-handed alpha
Helix 26
26
A
536 541Right-handed 310
Helix 27
27
A
542 550Right-handed alpha
Helix 28
28
A
551 556Right-handed 310
Helix 29
29
A
557 571Right-handed alpha
Helix 30
30
A
604 625Right-handed alpha
Helix 31
31
A
629 635Right-handed alpha
Helix 32
32
A
640 656Right-handed alpha
Helix 33
33
A
671 677Right-handed 310
Helix 34
34
A
678 684Right-handed alpha
Helix 35
35
A
702 706Right-handed 310
Helix 36
36
A
730 739Right-handed alpha
Helix 37
37
A
748 766Right-handed alpha
Helix 38
38
A
769 782Right-handed alpha
Helix 39
39
A
808 818Right-handed alpha
Helix 40
40
A
832 836Right-handed 310
Helix 41
41
A
840 847Right-handed alpha
Helix 42
42
A
853 862Right-handed alpha
Helix 43
43
A
862 875Right-handed alpha
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There are 5 sheets in PDB entry 4V0Q. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
250 252parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
97 103parallel
Strand 3
A
75 80parallel
Strand 4
A
142 145parallel
Strand 5
A
176 181parallel
Strand 6
A
217 220anti-parallel
Strand 7
A
203 205anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 309first strand
Strand 2
A
586 594anti-parallel
Strand 3
A
575 583anti-parallel
Strand 4
A
451 452parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 661first strand
Strand 2
A
664 667anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
712 717first strand
Strand 2
A
723 728anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il