Analysis of interatomic Contacts of Structural Units in PDB entry:
4V15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V15 entry

There are 2 chains in PDB entry 4V15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 7ARG 379
B
 GLY 8ARG 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4V15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 24Right-handed 310
Helix 2
2
A
33 50Right-handed alpha
Helix 3
3
A
58 61Right-handed 310
Helix 4
4
A
63 73Right-handed alpha
Helix 5
5
A
82 92Right-handed alpha
Helix 6
6
A
105 119Right-handed alpha
Helix 7
7
A
127 142Right-handed alpha
Helix 8
8
A
162 176Right-handed alpha
Helix 9
9
A
190 194Right-handed 310
Helix 10
10
A
196 221Right-handed alpha
Helix 11
11
A
235 240Right-handed alpha
Helix 12
12
A
251 255Right-handed 310
Helix 13
13
A
257 262Right-handed alpha
Helix 14
14
A
347 353Right-handed alpha
Helix 15
15
B
21 24Right-handed 310
Helix 16
16
B
33 50Right-handed alpha
Helix 17
17
B
58 61Right-handed 310
Helix 18
18
B
63 73Right-handed alpha
Helix 19
19
B
83 85Right-handed 310
Helix 20
20
B
86 92Right-handed alpha
Helix 21
21
B
105 119Right-handed alpha
Helix 22
22
B
127 142Right-handed alpha
Helix 23
23
B
162 176Right-handed alpha
Helix 24
24
B
189 194Right-handed 310
Helix 25
25
B
196 221Right-handed alpha
Helix 26
26
B
235 240Right-handed alpha
Helix 27
27
B
251 255Right-handed 310
Helix 28
28
B
257 262Right-handed alpha
Helix 29
29
B
347 353Right-handed alpha
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There are 6 sheets in PDB entry 4V15. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
340 344parallel
Strand 3
A
275 286parallel
Strand 4
A
289 292anti-parallel
Strand 5
A
324 328anti-parallel
Strand 6
A
314 319anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
340 344parallel
Strand 3
A
275 286parallel
Strand 4
A
28 32anti-parallel
Strand 5
A
357 362parallel
Strand 6
A
365 371anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
247 248parallel
Strand 3
A
227 230parallel
Strand 4
A
179 185parallel
Strand 5
A
145 150parallel
Strand 6
A
120 125parallel
Strand 7
A
96 102parallel
Strand 8
A
78 80parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
340 344parallel
Strand 3
B
275 286parallel
Strand 4
B
289 292anti-parallel
Strand 5
B
324 328anti-parallel
Strand 6
B
314 319anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
340 344parallel
Strand 3
B
275 286parallel
Strand 4
B
28 32anti-parallel
Strand 5
B
357 362parallel
Strand 6
B
365 371anti-parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
247 248parallel
Strand 3
B
227 230parallel
Strand 4
B
179 185parallel
Strand 5
B
145 150parallel
Strand 6
B
120 125parallel
Strand 7
B
96 99parallel
Strand 8
B
78 80parallel
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