Analysis of interatomic Contacts of Structural Units in PDB entry:
4V1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V1V entry

There are 2 chains in PDB entry 4V1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4PHE 775
B
 PRO 5TRP 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 4V1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 43Right-handed alpha
Helix 2
2
A
51 60Right-handed alpha
Helix 3
3
A
64 78Right-handed alpha
Helix 4
4
A
89 100Right-handed alpha
Helix 5
5
A
102 110Right-handed alpha
Helix 6
6
A
123 136Right-handed alpha
Helix 7
7
A
164 177Right-handed alpha
Helix 8
8
A
203 215Right-handed alpha
Helix 9
9
A
215 228Right-handed alpha
Helix 10
10
A
249 277Right-handed alpha
Helix 11
11
A
318 326Right-handed alpha
Helix 12
12
A
347 355Right-handed alpha
Helix 13
13
A
356 358Right-handed 310
Helix 14
14
A
394 401Right-handed alpha
Helix 15
15
A
412 431Right-handed alpha
Helix 16
16
A
442 447Right-handed alpha
Helix 17
17
A
452 458Right-handed alpha
Helix 18
18
A
460 466Right-handed alpha
Helix 19
19
A
466 473Right-handed alpha
Helix 20
20
A
509 513Right-handed alpha
Helix 21
21
A
537 561Right-handed alpha
Helix 22
22
A
569 573Right-handed 310
Helix 23
23
A
576 587Right-handed alpha
Helix 24
24
A
629 646Right-handed alpha
Helix 25
25
A
647 651Right-handed 310
Helix 26
26
A
652 656Right-handed 310
Helix 27
27
A
660 667Right-handed alpha
Helix 28
28
A
685 689Right-handed 310
Helix 29
29
A
696 711Right-handed alpha
Helix 30
30
A
747 756Right-handed alpha
Helix 31
31
A
764 768Right-handed 310
Helix 32
32
B
36 43Right-handed alpha
Helix 33
33
B
51 59Right-handed alpha
Helix 34
34
B
64 79Right-handed alpha
Helix 35
35
B
89 99Right-handed alpha
Helix 36
36
B
102 111Right-handed alpha
Helix 37
37
B
123 136Right-handed alpha
Helix 38
38
B
164 177Right-handed alpha
Helix 39
39
B
203 215Right-handed alpha
Helix 40
40
B
215 229Right-handed alpha
Helix 41
41
B
249 277Right-handed alpha
Helix 42
42
B
318 325Right-handed alpha
Helix 43
43
B
347 356Right-handed alpha
Helix 44
44
B
394 404Right-handed alpha
Helix 45
45
B
412 431Right-handed alpha
Helix 46
46
B
442 447Right-handed alpha
Helix 47
47
B
452 458Right-handed alpha
Helix 48
48
B
460 466Right-handed alpha
Helix 49
49
B
466 473Right-handed alpha
Helix 50
50
B
476 480Right-handed 310
Helix 51
51
B
509 513Right-handed alpha
Helix 52
52
B
537 560Right-handed alpha
Helix 53
53
B
576 588Right-handed alpha
Helix 54
54
B
629 646Right-handed alpha
Helix 55
55
B
647 651Right-handed 310
Helix 56
56
B
652 656Right-handed 310
Helix 57
57
B
660 667Right-handed alpha
Helix 58
58
B
685 689Right-handed 310
Helix 59
59
B
696 711Right-handed alpha
Helix 60
60
B
747 756Right-handed alpha
Helix 61
61
B
764 768Right-handed 310
Helix 62
62
C
23 28Right-handed alpha
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There are 18 sheets in PDB entry 4V1V. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
7 9anti-parallel
Strand 3
A
81 83anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 18first strand
Strand 2
A
22 26anti-parallel
Strand 3
A
31 35anti-parallel
Strand 4
C
30 33anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
154 157parallel
Strand 3
A
180 184parallel
Strand 4
A
189 196anti-parallel
Strand 5
A
289 294anti-parallel
Strand 6
A
299 304anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
381 385anti-parallel
Strand 3
A
407 410anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
491 498anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 508first strand
Strand 2
A
491 498anti-parallel
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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 535first strand
Strand 2
A
728 733anti-parallel
Strand 3
A
716 719anti-parallel
Strand 4
A
491 498anti-parallel
Strand 5
A
503 508anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 535first strand
Strand 2
A
728 733anti-parallel
Strand 3
A
716 719anti-parallel
Strand 4
A
491 498anti-parallel
Strand 5
A
439 441anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 596first strand
Strand 2
A
605 612anti-parallel
Strand 3
A
621 626anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
7 9anti-parallel
Strand 3
B
81 83anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 18first strand
Strand 2
B
22 26anti-parallel
Strand 3
B
31 35anti-parallel
Strand 4
D
30 33anti-parallel
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There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
B
113 118parallel
Strand 3
B
154 157parallel
Strand 4
B
180 184parallel
Strand 5
B
189 196anti-parallel
Strand 6
B
289 294anti-parallel
Strand 7
B
299 304anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 371first strand
Strand 2
B
381 385anti-parallel
Strand 3
B
406 410anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 441first strand
Strand 2
B
491 498anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
503 508first strand
Strand 2
B
491 498anti-parallel
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There are 5 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 535first strand
Strand 2
B
728 733anti-parallel
Strand 3
B
716 719anti-parallel
Strand 4
B
491 498anti-parallel
Strand 5
B
503 508anti-parallel
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There are 5 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 535first strand
Strand 2
B
728 733anti-parallel
Strand 3
B
716 719anti-parallel
Strand 4
B
491 498anti-parallel
Strand 5
B
439 441anti-parallel
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There are 3 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 596first strand
Strand 2
B
605 612anti-parallel
Strand 3
B
621 626anti-parallel
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