Analysis of interatomic Contacts of Structural Units in PDB entry:
4V24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V24 entry

There are 2 chains in PDB entry 4V24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 93SER 449
B
 PRO 93SER 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 4V24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
115 124Right-handed alpha
Helix 2
2
A
124 131Right-handed alpha
Helix 3
3
A
144 153Right-handed alpha
Helix 4
4
A
166 179Right-handed alpha
Helix 5
5
A
182 187Right-handed alpha
Helix 6
6
A
200 210Right-handed alpha
Helix 7
7
A
216 231Right-handed alpha
Helix 8
8
A
259 268Right-handed alpha
Helix 9
9
A
269 275Right-handed 310
Helix 10
10
A
276 288Right-handed alpha
Helix 11
11
A
301 305Right-handed alpha
Helix 12
12
A
381 392Right-handed alpha
Helix 13
13
A
393 395Right-handed 310
Helix 14
14
A
396 401Right-handed 310
Helix 15
15
B
115 124Right-handed alpha
Helix 16
16
B
124 131Right-handed alpha
Helix 17
17
B
144 152Right-handed alpha
Helix 18
18
B
166 179Right-handed alpha
Helix 19
19
B
182 187Right-handed alpha
Helix 20
20
B
200 210Right-handed alpha
Helix 21
21
B
216 231Right-handed alpha
Helix 22
22
B
259 268Right-handed alpha
Helix 23
23
B
269 275Right-handed 310
Helix 24
24
B
276 288Right-handed alpha
Helix 25
25
B
301 305Right-handed alpha
Helix 26
26
B
381 393Right-handed alpha
Helix 27
27
B
396 401Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 4V24. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
232 243anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
232 243anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
292 300anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
423 426anti-parallel
Strand 3
A
254 258anti-parallel
Strand 4
A
342 349anti-parallel
Strand 5
A
371 377parallel
Strand 6
A
405 417parallel
Strand 7
A
436 448anti-parallel
Strand 8
A
232 243anti-parallel
Strand 9
A
248 251anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
423 426anti-parallel
Strand 3
A
254 258anti-parallel
Strand 4
A
342 349anti-parallel
Strand 5
A
292 300anti-parallel
Strand 6
A
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 139first strand
Strand 2
A
101 107parallel
Strand 3
A
160 165parallel
Strand 4
A
191 195parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 96first strand
Strand 2
B
232 243parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 251first strand
Strand 2
B
232 243anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 337first strand
Strand 2
B
292 300anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 432first strand
Strand 2
B
423 426anti-parallel
Strand 3
B
254 258anti-parallel
Strand 4
B
342 349anti-parallel
Strand 5
B
371 377parallel
Strand 6
B
405 417parallel
Strand 7
B
436 448anti-parallel
Strand 8
B
232 243anti-parallel
Strand 9
B
248 251anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 432first strand
Strand 2
B
423 426anti-parallel
Strand 3
B
254 258anti-parallel
Strand 4
B
342 349anti-parallel
Strand 5
B
292 300anti-parallel
Strand 6
B
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 139first strand
Strand 2
B
101 107parallel
Strand 3
B
160 165parallel
Strand 4
B
191 195parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il