Analysis of interatomic Contacts of Structural Units in PDB entry:
4V2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V2C entry

There are 4 chains in PDB entry 4V2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 36PRO 361
B
 THR 50LEU 155
C
 CYS 36PRO 361
D
 THR 50LEU 155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 4V2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 85Right-handed 310
Helix 2
2
A
125 132Right-handed alpha
Helix 3
3
A
154 158Right-handed 310
Helix 4
4
A
315 317Right-handed 310
Helix 5
5
A
318 328Right-handed alpha
Helix 6
6
A
350 353Right-handed 310
Helix 7
7
B
91 93Right-handed 310
Helix 8
8
B
117 124Right-handed alpha
Helix 9
9
C
81 85Right-handed 310
Helix 10
10
C
125 132Right-handed alpha
Helix 11
11
C
154 158Right-handed 310
Helix 12
12
C
315 317Right-handed 310
Helix 13
13
C
318 328Right-handed alpha
Helix 14
14
C
350 353Right-handed 310
Helix 15
15
D
91 93Right-handed 310
Helix 16
16
D
117 124Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4V2C. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC, BD, CA, CB, A, DB, C, DD,

There are 14 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
46 48anti-parallel
Strand 3
A
67 69parallel
Strand 4
A
92 94parallel
Strand 5
A
113 115parallel
Strand 6
A
137 139parallel
Strand 7
A
163 165parallel
Strand 8
A
184 186parallel
Strand 9
A
208 210parallel
Strand 10
A
234 236parallel
Strand 11
A
256 258parallel
Strand 12
A
280 282parallel
Strand 13
A
304 306parallel
Strand 14
A
333 335parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
339 341parallel
Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
69 76anti-parallel
Strand 3
B
108 116anti-parallel
Strand 4
B
95 101anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
148 152parallel
Strand 3
B
131 137anti-parallel
Strand 4
B
142 144parallel
Back to list of sheets
Back to top of page

There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
148 152parallel
Strand 3
B
131 137anti-parallel
Strand 4
B
80 85anti-parallel
Strand 5
B
88 89anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
131 137parallel
Back to list of sheets
Back to top of page

There are 14 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 43first strand
Strand 2
C
46 48anti-parallel
Strand 3
C
67 69parallel
Strand 4
C
92 94parallel
Strand 5
C
113 115parallel
Strand 6
C
137 139parallel
Strand 7
C
163 165parallel
Strand 8
C
184 186parallel
Strand 9
C
208 210parallel
Strand 10
C
234 236parallel
Strand 11
C
256 258parallel
Strand 12
C
280 282parallel
Strand 13
C
304 306parallel
Strand 14
C
333 335parallel
Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
312 313first strand
Strand 2
C
339 341parallel
Back to list of sheets
Back to top of page

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 56first strand
Strand 2
D
69 76anti-parallel
Strand 3
D
108 116anti-parallel
Strand 4
D
95 101anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
148 152parallel
Strand 3
D
131 137anti-parallel
Strand 4
D
142 144parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
148 152parallel
Strand 3
D
131 137anti-parallel
Strand 4
D
80 85anti-parallel
Strand 5
D
88 89anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 144first strand
Strand 2
D
131 137parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il