Analysis of interatomic Contacts of Structural Units in PDB entry:
4V2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V2E entry

There are 2 chains in PDB entry 4V2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 30ALA 350
B
 SER 30ALA 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4V2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
76 80Right-handed 310
Helix 2
2
A
120 126Right-handed alpha
Helix 3
3
A
191 195Right-handed 310
Helix 4
4
A
314 321Right-handed alpha
Helix 5
5
B
76 80Right-handed 310
Helix 6
6
B
120 126Right-handed alpha
Helix 7
7
B
191 196Right-handed alpha
Helix 8
8
B
314 321Right-handed alpha
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There are 4 sheets in PDB entry 4V2E. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 14 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
41 43anti-parallel
Strand 3
A
62 64parallel
Strand 4
A
87 89parallel
Strand 5
A
108 110parallel
Strand 6
A
132 134parallel
Strand 7
A
158 160parallel
Strand 8
A
179 181parallel
Strand 9
A
203 205parallel
Strand 10
A
229 231parallel
Strand 11
A
251 253parallel
Strand 12
A
275 277parallel
Strand 13
A
299 301parallel
Strand 14
A
328 330parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
334 336parallel
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There are 14 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
41 43anti-parallel
Strand 3
B
62 64parallel
Strand 4
B
87 89parallel
Strand 5
B
108 110parallel
Strand 6
B
132 134parallel
Strand 7
B
158 160parallel
Strand 8
B
179 181parallel
Strand 9
B
203 205parallel
Strand 10
B
229 231parallel
Strand 11
B
251 253parallel
Strand 12
B
275 277parallel
Strand 13
B
299 301parallel
Strand 14
B
328 330parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
334 336parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il