Analysis of interatomic Contacts of Structural Units in PDB entry:
4V33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V33 entry

There are 4 chains in PDB entry 4V33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 45TYR 301
A
 PHE 303LYS 360
B
 GLU 45TYR 301
B
 PHE 303LYS 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4V33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
85 89Right-handed 310
Helix 2
2
A
96 100Right-handed 310
Helix 3
3
A
108 111Right-handed 310
Helix 4
4
A
160 162Right-handed 310
Helix 5
5
A
166 180Right-handed alpha
Helix 6
6
A
186 193Right-handed 310
Helix 7
7
A
210 222Right-handed alpha
Helix 8
8
A
236 239Right-handed 310
Helix 9
9
A
246 256Right-handed alpha
Helix 10
10
A
270 274Right-handed 310
Helix 11
11
A
276 293Right-handed alpha
Helix 12
12
A
307 316Right-handed alpha
Helix 13
13
A
336 340Right-handed 310
Helix 14
14
A
351 360Right-handed alpha
Helix 15
15
B
85 89Right-handed 310
Helix 16
16
B
96 100Right-handed 310
Helix 17
17
B
108 111Right-handed 310
Helix 18
18
B
160 162Right-handed 310
Helix 19
19
B
166 180Right-handed alpha
Helix 20
20
B
186 193Right-handed 310
Helix 21
21
B
210 222Right-handed alpha
Helix 22
22
B
236 239Right-handed 310
Helix 23
23
B
246 256Right-handed alpha
Helix 24
24
B
270 274Right-handed 310
Helix 25
25
B
276 293Right-handed alpha
Helix 26
26
B
307 318Right-handed alpha
Helix 27
27
B
336 340Right-handed 310
Helix 28
28
B
351 360Right-handed alpha
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There are 8 sheets in PDB entry 4V33. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
60 66anti-parallel
Strand 3
A
103 106anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
74 81anti-parallel
Strand 3
A
115 124anti-parallel
Strand 4
A
130 140anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 149first strand
Strand 2
A
199 206anti-parallel
Strand 3
A
230 234parallel
Strand 4
A
259 263parallel
Strand 5
A
298 300anti-parallel
Strand 6
A
320 326parallel
Strand 7
A
341 345parallel
Strand 8
A
146 149first strand
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
164 165parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 51first strand
Strand 2
B
60 66anti-parallel
Strand 3
B
103 106anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 94first strand
Strand 2
B
74 81anti-parallel
Strand 3
B
115 124anti-parallel
Strand 4
B
130 140anti-parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 149first strand
Strand 2
B
199 206anti-parallel
Strand 3
B
230 234parallel
Strand 4
B
259 263parallel
Strand 5
B
298 300anti-parallel
Strand 6
B
320 326parallel
Strand 7
B
341 345parallel
Strand 8
B
146 149first strand
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
164 165parallel
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