Analysis of interatomic Contacts of Structural Units in PDB entry:
4V36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4V36 entry

There are 2 chains in PDB entry 4V36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 523LYS 850
B
 LYS 523ARG 848
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4V36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
530 541Right-handed alpha
Helix 2
2
A
546 553Right-handed 310
Helix 3
3
A
588 603Right-handed alpha
Helix 4
4
A
613 615Right-handed 310
Helix 5
5
A
616 622Right-handed alpha
Helix 6
6
A
648 661Right-handed alpha
Helix 7
7
A
673 689Right-handed alpha
Helix 8
8
A
702 707Right-handed alpha
Helix 9
9
A
750 767Right-handed alpha
Helix 10
10
A
790 801Right-handed alpha
Helix 11
11
A
810 816Right-handed alpha
Helix 12
12
A
830 832Right-handed 310
Helix 13
13
A
833 846Right-handed alpha
Helix 14
14
B
530 541Right-handed alpha
Helix 15
15
B
546 553Right-handed 310
Helix 16
16
B
588 603Right-handed alpha
Helix 17
17
B
613 623Right-handed 310
Helix 18
18
B
645 647Right-handed 310
Helix 19
19
B
648 661Right-handed alpha
Helix 20
20
B
673 689Right-handed alpha
Helix 21
21
B
702 707Right-handed alpha
Helix 22
22
B
750 766Right-handed alpha
Helix 23
23
B
795 804Right-handed alpha
Helix 24
24
B
809 816Right-handed alpha
Helix 25
25
B
833 847Right-handed alpha
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There are 8 sheets in PDB entry 4V36. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 559first strand
Strand 2
A
565 572anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 584first strand
Strand 2
A
565 572parallel
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There are 11 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 668first strand
Strand 2
A
711 715anti-parallel
Strand 3
A
721 728anti-parallel
Strand 4
A
735 743anti-parallel
Strand 5
A
770 776parallel
Strand 6
A
626 637anti-parallel
Strand 7
A
820 828anti-parallel
Strand 8
A
606 612anti-parallel
Strand 9
A
575 579parallel
Strand 10
A
565 572anti-parallel
Strand 11
A
583 584parallel
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There are 11 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 668first strand
Strand 2
A
711 715anti-parallel
Strand 3
A
721 728anti-parallel
Strand 4
A
735 743anti-parallel
Strand 5
A
770 776parallel
Strand 6
A
626 637anti-parallel
Strand 7
A
820 828anti-parallel
Strand 8
A
606 612anti-parallel
Strand 9
A
575 579parallel
Strand 10
A
565 572anti-parallel
Strand 11
A
556 559anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
556 559first strand
Strand 2
B
565 572anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
583 584first strand
Strand 2
B
565 572parallel
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There are 11 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
664 668first strand
Strand 2
B
711 715anti-parallel
Strand 3
B
721 731anti-parallel
Strand 4
B
735 743anti-parallel
Strand 5
B
770 776parallel
Strand 6
B
625 637anti-parallel
Strand 7
B
820 829anti-parallel
Strand 8
B
606 612anti-parallel
Strand 9
B
575 579parallel
Strand 10
B
565 572anti-parallel
Strand 11
B
583 584parallel
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There are 11 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
664 668first strand
Strand 2
B
711 715anti-parallel
Strand 3
B
721 731anti-parallel
Strand 4
B
735 743anti-parallel
Strand 5
B
770 776parallel
Strand 6
B
625 637anti-parallel
Strand 7
B
820 829anti-parallel
Strand 8
B
606 612anti-parallel
Strand 9
B
575 579parallel
Strand 10
B
565 572anti-parallel
Strand 11
B
556 559anti-parallel
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