Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4V7F entry
There are 48 chains in PDB entry 4V7F
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
1
|
U 3 | U 3396 |
2
|
A 1 | U 158 |
3
|
G 1 | U 121 |
A
|
MET 1 | TYR 217 |
B
|
GLY 2 | GLN 253 |
C
|
SER 2 | LEU 387 |
D
|
SER 2 | ASP 362 |
E
|
GLN 6 | LYS 174 |
F
|
MET 1 | LEU 191 |
G
|
SER 2 | PHE 176 |
H
|
ASN 24 | ALA 256 |
I
|
TYR 12 | SER 138 |
J
|
VAL 3 | TYR 199 |
K
|
ALA 2 | GLU 194 |
L
|
SER 2 | VAL 137 |
M
|
THR 3 | ALA 138 |
N
|
PRO 2 | ALA 149 |
O
|
GLY 2 | LYS 204 |
P
|
ALA 2 | GLN 297 |
Q
|
GLY 2 | VAL 186 |
R
|
ALA 2 | ALA 189 |
S
|
MET 1 | TYR 172 |
T
|
GLY 2 | ILE 160 |
U
|
ALA 2 | ALA 184 |
V
|
GLN 9 | TYR 108 |
W
|
LYS 22 | ILE 142 |
X
|
ALA 2 | GLU 127 |
Y
|
ALA 2 | PHE 136 |
Z
|
ALA 2 | ALA 120 |
a
|
ALA 23 | ASN 244 |
b
|
SER 9 | ALA 105 |
c
|
LEU 4 | ASP 112 |
d
|
ALA 2 | LEU 128 |
e
|
ALA 2 | ILE 107 |
f
|
ALA 2 | LYS 113 |
g
|
THR 2 | HIS 100 |
h
|
GLY 2 | ALA 88 |
i
|
ALA 2 | LEU 78 |
j
|
ALA 2 | ILE 51 |
k
|
ALA 2 | ALA 92 |
l
|
LYS 15 | THR 558 |
m
|
MET 1 | LEU 224 |
n
|
MET 1 | GLU 236 |
o
|
MET 1 | LYS 347 |
p
|
MET 1 | LEU 63 |
q
|
PRO 30 | HIS 515 |
r
|
MET 1 | ASN 322 |
s
|
MET 1 | ASN 322 |
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There are no helices in PDB entry
4V7F
There are no sheets in PDB entry
4V7F
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il